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SCN18_26_2_15_R1_B_scaffold_1276

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R1_B_scaffold_1276_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..793
DNA (792bp) protein (264aa)
TRAP dicarboxylate transporter subunit DctM n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YA98_9RHIZ
TRAP dicarboxylate transporter subunit DctM {ECO:0000313|EMBL:EHH11411.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
TRAP dicarboxylate transporter subunit DctM
SCN18_26_2_15_R1_B_scaffold_1276_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(803..1909)
DNA (1107bp) protein (369aa)
ABC transporter substrate-binding protein n=1 Tax=Rhizobium loti RepID=UPI00037E25C3
TRAP-T family sorbitol/mannitol transporter, periplasmic binding protein, SmoM {ECO:0000313|EMBL:AID34006.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
family 7 extracellular solute-binding protein
SCN18_26_2_15_R1_B_scaffold_1276_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2222..2995
DNA (774bp) protein (258aa)
gamma-glutamyl-gamma-aminobutyrate hydrolase (EC:3.5.1.94)
UPI0003CE0B99 related cluster n=1 Tax=unknown RepID=UPI0003CE0B99
Glutamine amidotransferase {ECO:0000313|EMBL:ESY68263.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
SCN18_26_2_15_R1_B_scaffold_1276_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3029..4012)
DNA (984bp) protein (328aa)
Glycerate dehydrogenase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HN70_9RHIZ
Glycerate dehydrogenase {ECO:0000313|EMBL:EHK57864.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase protein
SCN18_26_2_15_R1_B_scaffold_1276_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4047..5147)
DNA (1101bp) protein (367aa)
transcriptional regulator n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00036B8C3C
Transcriptional regulator {ECO:0000313|EMBL:ESZ22540.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
alanine racemase
SCN18_26_2_15_R1_B_scaffold_1276_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5131..6057)
DNA (927bp) protein (309aa)
UPI0003CEECBD related cluster n=1 Tax=unknown RepID=UPI0003CEECBD
Uncharacterized protein {ECO:0000313|EMBL:ESZ43794.1}; TaxID=1287100 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C054A000.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1276_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6207..6668)
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HN66_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57860.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
transcriptional regulator
SCN18_26_2_15_R1_B_scaffold_1276_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6821..7987)
DNA (1167bp) protein (389aa)
fumarylacetoacetate hydrolase n=1 Tax=Pannonibacter phragmitetus RepID=UPI000361AD7C
Strain MEJ076 contig_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ03401.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
fumarylacetoacetate (FAA) hydrolase
SCN18_26_2_15_R1_B_scaffold_1276_9
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8148..9218
DNA (1071bp) protein (357aa)
PREDICTED: COBW domain-containing protein 1-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C191C4
Cobalamin synthesis protein P47K {ECO:0000313|EMBL:CDX37839.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
cobalamin biosynthesis CobW-like protein
SCN18_26_2_15_R1_B_scaffold_1276_10
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9253..9630
DNA (378bp) protein (126aa)
UPI0003CEB5E1 related cluster n=1 Tax=unknown RepID=UPI0003CEB5E1
Uncharacterized protein {ECO:0000313|EMBL:ESY68253.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
SCN18_26_2_15_R1_B_scaffold_1276_11
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9602..10576
DNA (975bp) protein (325aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HN63_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57857.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
WD40 repeat-containing protein
SCN18_26_2_15_R1_B_scaffold_1276_12
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10777..12153
DNA (1377bp) protein (459aa)
PREDICTED: glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C17A4B
Aminotransferase {ECO:0000313|EMBL:EZQ13206.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
class III aminotransferase
SCN18_26_2_15_R1_B_scaffold_1276_13
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12356..13744
DNA (1389bp) protein (463aa)
PREDICTED: type-1 glutamine synthetase 2-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1154F
Glutamine synthetase {ECO:0000313|EMBL:EZQ13207.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
glutamine synthetase
SCN18_26_2_15_R1_B_scaffold_1276_14
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13756..14313)
DNA (558bp) protein (186aa)
HNH endonuclease n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y372_MESOW
HNH endonuclease
HNH endonuclease {ECO:0000313|EMBL:AEH86116.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCN18_26_2_15_R1_B_scaffold_1276_15
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14539..15198)
DNA (660bp) protein (220aa)
DNA-3-methyladenine glycosidase II n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HMT1_9RHIZ
DNA-3-methyladenine glycosidase II {ECO:0000313|EMBL:EHK57953.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
HhH-GPD family protein
SCN18_26_2_15_R1_B_scaffold_1276_16
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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15271..16161
DNA (891bp) protein (297aa)
Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TAJ2_MESCW
glutamyl/glutaminyl-tRNA synthetase class Ic, catalytic domain
Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain {ECO:0000313|EMBL:ADV10741.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCN18_26_2_15_R1_B_scaffold_1276_17
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16282..16452
DNA (171bp) protein (57aa)
Flp/Fap pilin component n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PRY0_9RHIZ
Flp/Fap pilin component {ECO:0000313|EMBL:CCM73942.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
Flp/Fap pilin protein
SCN18_26_2_15_R1_B_scaffold_1276_18
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16558..17448
DNA (891bp) protein (297aa)
Peptide ABC transporter ATP-binding protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FDC2_9RHIZ
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESW82536.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
EamA-like transporter family
SCN18_26_2_15_R1_B_scaffold_1276_19
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17415..18266)
DNA (852bp) protein (284aa)
ribonuclease BN n=1 Tax=Hoeflea sp. 108 RepID=UPI00035F3C9B
Ribonuclease BN {ECO:0000313|EMBL:ESW82535.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
ribonuclease BN
SCN18_26_2_15_R1_B_scaffold_1276_20
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18494..18685
DNA (192bp) protein (64aa)
UPI0003D02D92 related cluster n=1 Tax=unknown RepID=UPI0003D02D92
Membrane protein {ECO:0000313|EMBL:ESZ22044.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1276_21
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18696..19274
DNA (579bp) protein (193aa)
ATP/cobalamin adenosyltransferase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y3I2_9RHIZ
ATP/cobalamin adenosyltransferase {ECO:0000313|EMBL:EHH13690.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1276_22
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19323..20060
DNA (738bp) protein (246aa)
Rhomboid family protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HMS3_9RHIZ
Rhomboid family protein {ECO:0000313|EMBL:EHK57945.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1276_23
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20120..21004
DNA (885bp) protein (295aa)
UPI0003CE9787 related cluster n=1 Tax=unknown RepID=UPI0003CE9787
Uncharacterized protein {ECO:0000313|EMBL:CDX11305.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1276_24
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21221..21970
DNA (750bp) protein (250aa)
Electron transfer flavoprotein alpha/beta-subunit n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HMS1_9RHIZ
Electron transfer flavoprotein alpha/beta-subunit {ECO:0000313|EMBL:EHK57943.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Electron transfer flavoprotein alpha/beta-subunit
SCN18_26_2_15_R1_B_scaffold_1276_25
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22181..23110
DNA (930bp) protein (310aa)
electron transfer flavoprotein subunit beta n=1 Tax=Hoeflea sp. 108 RepID=UPI00035CD797
Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:EXL06597.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
Electron transfer flavoprotein alpha subunit
SCN18_26_2_15_R1_B_scaffold_1276_26
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23176..24804)
DNA (1629bp) protein (543aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11EY0_MESSB
Uncharacterized protein {ECO:0000313|EMBL:KKB86045.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1276_27
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25037..25912
DNA (876bp) protein (292aa)
3-hydroxybutyryl-CoA dehydrogenase (Beta-hydroxybutyryl-CoA dehydrogenase) (BHBD) {ECO:0000313|EMBL:CCV05156.1}; EC=1.1.1.157 {ECO:0000313|EMBL:CCV05156.1};; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
3-hydroxybutyryl-CoA dehydrogenase (Beta-hydroxybutyryl-CoA dehydrogenase) (BHBD) n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F020_9RHIZ
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
Displaying 27 items

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