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SCN18_26_2_15_R1_B_scaffold_3949

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R1_B_scaffold_3949_1
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..1021)
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036E5771
sugar isomerase (SIS)
Tax=RBG_13_Chloroflexi_50_21_curated
SCN18_26_2_15_R1_B_scaffold_3949_2
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1161..2099)
DNA (939bp) protein (313aa)
sugar ABC transporter permease n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003020B91
Sugar ABC transporter permease {ECO:0000313|EMBL:KHJ54129.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
inner-membrane translocator
SCN18_26_2_15_R1_B_scaffold_3949_3
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2153..3121)
DNA (969bp) protein (323aa)
ABC transporter, membrane spanning protein (Sugar) n=1 Tax=Ketogulonicigenium vulgare (strain Y25) RepID=E3EZQ3_KETVY
sugar ABC transporter transmembrane protein
ABC transporter, membrane spanning protein (Sugar) {ECO:0000313|EMBL:ADO41621.1}; TaxID=880591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ketogulonicigenium.;" source="Ketogulonicigenium vulgare (strain Y25).;"
SCN18_26_2_15_R1_B_scaffold_3949_4
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3123..4646)
DNA (1524bp) protein (508aa)
sugar ABC transporter ATP-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037DA3C2
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:EZQ17687.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
rbsA1; ribose/galactose/methyl galactoside import ATP-bindingprotein 3
SCN18_26_2_15_R1_B_scaffold_3949_5
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4665..5657)
DNA (993bp) protein (331aa)
Sugar ABC transporter substrate-binding protein n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8A9E3_RHIRD
Putative sugar ABC transporter, substrate binding protein putative ribose ABC transporter {ECO:0000313|EMBL:KFC72720.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
rbsB; ribose transport system substrate-binding protein
SCN18_26_2_15_R1_B_scaffold_3949_6
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5752..6306)
DNA (555bp) protein (185aa)
PREDICTED: probable RuBisCO transcriptional regulator-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1135B
Transcriptional regulator, LysR family {ECO:0000313|EMBL:KFC62035.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
LysR family transcriptional regulator
SCN18_26_2_15_R1_B_scaffold_3949_7
unknown

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comp(6246..6476)
DNA (231bp) protein (77aa)

This feature has no annotations

SCN18_26_2_15_R1_B_scaffold_3949_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6506..7834
DNA (1329bp) protein (443aa)
Lipid A export ATP-binding/permease protein MsbA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6N4_PELHB
lipid A export ATP-binding/permease protein MsbA
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:AEQ52196.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
Displaying 8 items

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