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SCN18_26_2_15_R1_B_scaffold_2882

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R1_B_scaffold_2882_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(74..331)
DNA (258bp) protein (86aa)
SCN18_26_2_15_R1_B_scaffold_2882_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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721..3243
DNA (2523bp) protein (841aa)
Cas3: CRISPR-associated helicase Cas3 n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LM38_DINSH
cas3; CRISPR-associated protein Cas3
Cas3: CRISPR-associated helicase Cas3 {ECO:0000313|EMBL:ABV94947.1}; TaxID=398580 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Dinoroseobacter.;" source="Dinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12).;"
SCN18_26_2_15_R1_B_scaffold_2882_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3666..5234
DNA (1569bp) protein (523aa)
CRISPR-associated protein, Cse1 family n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LM39_DINSH
cse1; Cse1 family CRISPR-associated protein
CRISPR-associated protein, Cse1 family {ECO:0000313|EMBL:ABV94948.1}; TaxID=398580 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Dinoroseobacter.;" source="Dinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12).;"
SCN18_26_2_15_R1_B_scaffold_2882_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5227..5850
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LMM4_DINSH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABV94949.1}; TaxID=398580 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Dinoroseobacter.;" source="Dinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12).;"
SCN18_26_2_15_R1_B_scaffold_2882_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5843..6970
DNA (1128bp) protein (376aa)
CRISPR-associated protein n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LMM5_DINSH
cse3; CRISPR-associated protein
CRISPR-associated protein {ECO:0000313|EMBL:ABV94950.1}; TaxID=398580 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Dinoroseobacter.;" source="Dinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12).;"
SCN18_26_2_15_R1_B_scaffold_2882_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6967..7686
DNA (720bp) protein (240aa)
CRISPR-associated protein Cas5 family n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LMM6_DINSH
cas5; Cas5 family CRISPR-associated protein
CRISPR-associated protein Cas5 family {ECO:0000313|EMBL:ABV94951.1}; TaxID=398580 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Dinoroseobacter.;" source="Dinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12).;"
SCN18_26_2_15_R1_B_scaffold_2882_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7683..8465
DNA (783bp) protein (261aa)
CRISPR-associated protein n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LMM7_DINSH
cse2; CRISPR-associated protein
CRISPR-associated protein {ECO:0000313|EMBL:ABV94952.1}; TaxID=398580 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Dinoroseobacter.;" source="Dinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12).;"
SCN18_26_2_15_R1_B_scaffold_2882_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8471..9427
DNA (957bp) protein (319aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
CRISPR-associated endonuclease Cas1 n=2 Tax=Rhodospirillum rubrum RepID=G2T833_RHORU
CRISPR-associated Cas1 family protein
SCN18_26_2_15_R1_B_scaffold_2882_9
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9429..9779
DNA (351bp) protein (117aa)
CRISPR-associated Cas2 family protein n=2 Tax=Rhodospirillum rubrum RepID=G2T834_RHORU
Putative CRISPR-associated helicase Cas3 {ECO:0000313|EMBL:GAM02312.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
CRISPR-associated Cas2 family protein
SCN18_26_2_15_R1_B_scaffold_2882_10
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9786..10847)
DNA (1062bp) protein (354aa)
hypothetical protein id=12556827 bin=CNBR_ACIDO species=Streptomyces sp. HK1 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Uncharacterized protein {ECO:0000313|EMBL:EFW09849.1}; TaxID=888051 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 178 str. F0338.;"
hypothetical protein
Displaying 10 items

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