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SCN18_26_2_15_R1_B_scaffold_983

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R1_B_scaffold_983_1
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..2069)
DNA (2067bp) protein (689aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
Transcription-repair coupling factor n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FID2_9RHIZ
transcription-repair coupling factor
SCN18_26_2_15_R1_B_scaffold_983_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2081..2368)
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y8K3_9RHIZ
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EHH11955.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
SCN18_26_2_15_R1_B_scaffold_983_3
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2734..4842
DNA (2109bp) protein (703aa)
ATP-dependent DNA helicase {ECO:0000313|EMBL:CDX11589.1}; EC=3.6.1.- {ECO:0000313|EMBL:CDX11589.1};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
UPI0003D024DA related cluster n=1 Tax=unknown RepID=UPI0003D024DA
ATP-dependent DNA helicase RecG
SCN18_26_2_15_R1_B_scaffold_983_4
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4846..5517)
DNA (672bp) protein (224aa)
membrane protein n=1 Tax=Rhizobium loti RepID=UPI00036709B7
Uncharacterized protein {ECO:0000313|EMBL:CDX29286.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_983_5
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5623..7446)
DNA (1824bp) protein (608aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
glucosamine--fructose-6-phosphate aminotransferase n=1 Tax=Hoeflea sp. 108 RepID=UPI00035CB051
SCN18_26_2_15_R1_B_scaffold_983_6
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7590..8951)
DNA (1362bp) protein (454aa)
Bifunctional protein GlmU n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVK1_9RHIZ
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase
SCN18_26_2_15_R1_B_scaffold_983_7
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9003..9749)
DNA (747bp) protein (249aa)
UPI0003D06999 related cluster n=1 Tax=unknown RepID=UPI0003D06999
Cytochrome C biogenesis protein {ECO:0000313|EMBL:ESZ76627.1}; TaxID=1287074 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C105A0.;"
cytochrome C biogenesis protein transmembrane region
SCN18_26_2_15_R1_B_scaffold_983_8
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9850..10140)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00035D87EB
Uncharacterized protein {ECO:0000313|EMBL:KJC39814.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_983_trna_1
unknown

Not on your lists

10391..10468
DNA (78bp)
transferRNA Lys
SCN18_26_2_15_R1_B_scaffold_983_9
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10500..11687)
DNA (1188bp) protein (396aa)
Uncharacterized oxidoreductase y4hM {ECO:0000313|EMBL:CDX28094.1}; EC=1.-.-.- {ECO:0000313|EMBL:CDX28094.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
oxidoreductase n=1 Tax=Rhizobium loti RepID=UPI00035DE73F
putative dehydrogenase
SCN18_26_2_15_R1_B_scaffold_983_10
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12052..12834
DNA (783bp) protein (261aa)
UPI0003CE5652 related cluster n=1 Tax=unknown RepID=UPI0003CE5652
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CDX32352.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
SCN18_26_2_15_R1_B_scaffold_983_11
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12837..14348
DNA (1512bp) protein (504aa)
UPI0003CF0CB6 related cluster n=1 Tax=unknown RepID=UPI0003CF0CB6
Putative mannonate dehydrogenase {ECO:0000313|EMBL:CDX55156.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
mannitol dehydrogenase domain-containing protein
SCN18_26_2_15_R1_B_scaffold_983_12
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14394..15308
DNA (915bp) protein (305aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YDW6_9RHIZ
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:CDX28089.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_983_13
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15362..16405
DNA (1044bp) protein (348aa)
Ribose binding protein of ABC transporter n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YDW5_9RHIZ
Ribose binding protein of ABC transporter {ECO:0000313|EMBL:EHH10077.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
ribose binding protein of ABC transporter
SCN18_26_2_15_R1_B_scaffold_983_14
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16424..18016
DNA (1593bp) protein (531aa)
UPI0003CFBDB6 related cluster n=1 Tax=unknown RepID=UPI0003CFBDB6
Sugar ABC transporter {ECO:0000313|EMBL:ESZ18097.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
ABC-type sugar transport system, ATPase component
SCN18_26_2_15_R1_B_scaffold_983_15
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18013..18987
DNA (975bp) protein (325aa)
Permease protein of ribose ABC transporter n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YDW3_9RHIZ
Permease protein of ribose ABC transporter {ECO:0000313|EMBL:EHH10075.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
permease component of ribose/xylose/arabinose/galactoside ABC-type transporters
SCN18_26_2_15_R1_B_scaffold_983_16
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18984..19973
DNA (990bp) protein (330aa)
ribose ABC transporter permease n=1 Tax=Rhizobium loti RepID=UPI0003815C1A
Inner-membrane translocator {ECO:0000313|EMBL:CCV10772.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
inner-membrane translocator
SCN18_26_2_15_R1_B_scaffold_983_17
Nitrosospira multiformis_SCNPILOT_SOLID_1_TRIM150_Nitrosospira_54_27, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19984..20553)
DNA (570bp) protein (190aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
Putative 3-methyladenine DNA glycosylase n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z9E7_9BRAD
3-methyladenine DNA glycosylase
SCN18_26_2_15_R1_B_scaffold_983_18
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20550..21395)
DNA (846bp) protein (282aa)
Endonuclease n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FEY7_9RHIZ
Endonuclease {ECO:0000313|EMBL:ESX70599.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
endonuclease/exonuclease/phosphatase
SCN18_26_2_15_R1_B_scaffold_983_19
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21504..22016)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IK37_AZOC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF86394.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCN18_26_2_15_R1_B_scaffold_983_20
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22155..23120
DNA (966bp) protein (322aa)
cobalamin biosynthesis protein CobD n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002FE6794
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
cobalamin biosynthesis protein CobD
SCN18_26_2_15_R1_B_scaffold_983_21
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23104..24567)
DNA (1464bp) protein (488aa)
cobyric acid synthase n=1 Tax=Xanthobacteraceae RepID=UPI00036CBF79
Adenosylcobyric acid synthase (glutamine-hydrolyzing)
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
SCN18_26_2_15_R1_B_scaffold_983_22
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24571..25182)
DNA (612bp) protein (204aa)
UPI0003CE7522 related cluster n=1 Tax=unknown RepID=UPI0003CE7522
Cobinamide adenolsyltransferase {ECO:0000313|EMBL:ESY78004.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
cob(I)alamin adenosyltransferase
SCN18_26_2_15_R1_B_scaffold_983_23
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25183..25695)
DNA (513bp) protein (171aa)
adenosylcobinamide kinase n=1 Tax=Hoeflea sp. 108 RepID=UPI00035EF80F
Adenosylcobinamide kinase {ECO:0000313|EMBL:EXL09891.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
cobinamide kinase
SCN18_26_2_15_R1_B_scaffold_983_24
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25688..26461)
DNA (774bp) protein (258aa)
Cobalt transporter subunit CbtA n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YCK3_9RHIZ
Cobalt transporter subunit CbtA {ECO:0000313|EMBL:EHH10325.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
cobalt transporter subunit CbtA
SCN18_26_2_15_R1_B_scaffold_983_25
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26474..26647)
DNA (174bp) protein (58aa)
cobalt transporter subunit CbtB n=1 Tax=Hoeflea sp. 108 RepID=UPI00035E01C6
Cobalt transporter subunit CbtB {ECO:0000313|EMBL:ESY78001.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
cobalt transporter subunit CbtB
SCN18_26_2_15_R1_B_scaffold_983_26
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27172..27594
DNA (423bp) protein (141aa)
Putative metal-binding protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KMM7_MESAW
Uncharacterized protein {ECO:0000313|EMBL:AID30788.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
putative metal-binding protein
SCN18_26_2_15_R1_B_scaffold_983_27
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27591..28625
DNA (1035bp) protein (345aa)
CobW n=1 Tax=Hoeflea sp. 108 RepID=UPI0003708728
Protein CobW {ECO:0000313|EMBL:CDX29722.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
cobalamin biosynthesis protein CobW
SCN18_26_2_15_R1_B_scaffold_983_28
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28648..32034
DNA (3387bp) protein (1129aa)
cobaltochelatase subunit CobN (EC:6.6.1.2)
Cobaltochelatase, CobN subunit n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TH78_MESCW
Cobalt chelatase {ECO:0000313|EMBL:EXL09925.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
SCN18_26_2_15_R1_B_scaffold_983_29
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32031..33290
DNA (1260bp) protein (420aa)
cobalamin biosynthesis protein CobG n=1 Tax=Rhizobium loti RepID=UPI0003776719
Precorrin-3B synthase {ECO:0000313|EMBL:AID30791.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
precorrin-3B synthase
Displaying items 1-30 of 34 in total

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