ggKbase home page

SCN18_26_2_15_R1_B_scaffold_1165_18

Organism: SCN18_26_2_15_R1_B_SCNPILOT_CONT_1000_BF_Rhizobiales_65_79_66_12

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(16186..17397)

Top 3 Functional Annotations

Value Algorithm Source
Bifunctional enzyme IspD/IspF n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ES58_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 65.7
  • Coverage: 399.0
  • Bit_score: 528
  • Evalue 4.10e-147
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.3
  • Coverage: 403.0
  • Bit_score: 530
  • Evalue 1.50e-147
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase similarity KEGG
DB: KEGG
  • Identity: 63.7
  • Coverage: 399.0
  • Bit_score: 515
  • Evalue 1.00e-143

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1212
ATGGCGGACGCCGCAAACCAGCAAGGCTCGGAGAGGTCGGGCGTCGTCATCGTGGCGGCGGGGCGCGGCTCGCGGGTCGGCGCAGGCGACGTCCCGAAGCAATACCGTATGATCGGCGGAGTGCCGATCCTGCGGCGTAGCGTCGAAGCCTTTTCCCAGCATCCGAAGATTGCGGATATCATCGTCGTCATCGGCCCGGATGACGGAGCGCTCTTCCAAGCGGCCATGGCCGGACTCGAGGGACGGGTGCGGACCGCCATCGGCGGGGCCAGCCGGCAGGCCTCGGTGCGGGCGGGCCTGGAGGCGCTGCGAGACAGCGCACCGGCCAAGGTGCTCATCCACGACGCGGCAAGGCCGTTCGTCGACGGACCCTTGATCGACCGGACGCTGGCCGCGATCGATGCGTCGCATGGCGCCCTGCCCGCCATTCCCGTCTCCGACACGCTGAAGCGCGGCGACGCGGCCGGAATGATCGTCGAAACCGTGGCCCGGGCCGGCCTTTTCGCCGCGCAGACGCCGCAGGGCTTTCCCTACGGCGCAATCCTTCGGGCGCACAGGAATGCAGCCGAAGCCGGACGGGACGATTTCACGGACGATGCGGCGCTCGCGGAATGGGCCGGCATGCCGGCCCGGCTGGTCGAGGGCTCGCCGGCCAACGTCAAGCTCACCTGGCAGAAGGATATCGAGATGGCCGACCTGCATCTGTCTGCGGCGCGCGTGCCGGACGTGCGCGTCGGCAACGGCTACGACGTGCACGCCTTCGAGCCTGGGGACCATGTCTGGCTCTGCGGCGTCAGGATCCCGCACACGCGCAGGCTCTCGGGGCATTCCGACGCCGACGTGGCGCTGCACGCGCTGACCGACGCGCTTCTGGCGACCTGCGGCGCGGGCGACATCGGCGTGCATTTCCCGCCGTCCGACCCGCAATGGAAGGGCGCGGCCTCGCACATATTCCTCTCCCGCGCCGCGGAACTCGTGCGCGGCAGGGGCGGCCGGATCGGAAATGTCGATGTCACCCTGATCTGCGAGGCGCCGAGGATCGGTCCTCACCGGGATGCGATGGTGAAGCGCATGGCCGAAATCCTGAACCTCGATCCGGAACGCGTTTCCGTGAAGGCCACGACCAACGAAAGACTGGGCTTCATCGGCCGCGAGGAAGGCATCGCGGCCATCGCCACGGCGACGGTGATCTACGGCAACGGAGCAGCATGA
PROTEIN sequence
Length: 404
MADAANQQGSERSGVVIVAAGRGSRVGAGDVPKQYRMIGGVPILRRSVEAFSQHPKIADIIVVIGPDDGALFQAAMAGLEGRVRTAIGGASRQASVRAGLEALRDSAPAKVLIHDAARPFVDGPLIDRTLAAIDASHGALPAIPVSDTLKRGDAAGMIVETVARAGLFAAQTPQGFPYGAILRAHRNAAEAGRDDFTDDAALAEWAGMPARLVEGSPANVKLTWQKDIEMADLHLSAARVPDVRVGNGYDVHAFEPGDHVWLCGVRIPHTRRLSGHSDADVALHALTDALLATCGAGDIGVHFPPSDPQWKGAASHIFLSRAAELVRGRGGRIGNVDVTLICEAPRIGPHRDAMVKRMAEILNLDPERVSVKATTNERLGFIGREEGIAAIATATVIYGNGAA*