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SCN18_26_2_15_R1_B_scaffold_1165

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R1_B_scaffold_1165_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1629
DNA (1629bp) protein (543aa)
ATP-dependent Clp protease ATP-binding protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002DE951D
ATP-dependent Clp protease ATP-binding subunit ClpA {ECO:0000313|EMBL:EHK55125.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ATP-dependent Clp protease ATP-binding subunit clpA
SCN18_26_2_15_R1_B_scaffold_1165_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1788..3287
DNA (1500bp) protein (500aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HW76_9RHIZ
SCN18_26_2_15_R1_B_scaffold_1165_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3389..3787
DNA (399bp) protein (133aa)
NADH dehydrogenase {ECO:0000313|EMBL:EZQ15321.1}; EC=1.6.99.3 {ECO:0000313|EMBL:EZQ15321.1};; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
NADH dehydrogenase (EC:1.6.99.3)
PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C15D05
SCN18_26_2_15_R1_B_scaffold_1165_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3951..4445
DNA (495bp) protein (165aa)
Glycosyl hydrolase family 5 n=2 Tax=Mesorhizobium RepID=V7G906_9RHIZ
Glycosyl hydrolase family 5 {ECO:0000313|EMBL:ESX50010.1}; TaxID=1287298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC426A00.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1165_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4575..5849
DNA (1275bp) protein (425aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
Enolase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FBC2_9RHIZ
eno; phosphopyruvate hydratase
SCN18_26_2_15_R1_B_scaffold_1165_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5929..6255
DNA (327bp) protein (109aa)
Cell division protein n=1 Tax=Mesorhizobium sp. LNJC380A00 RepID=V7GHG5_9RHIZ
Cell division protein {ECO:0000313|EMBL:ESY24469.1}; TaxID=1287273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC391B00.;"
Septum formation initiator
SCN18_26_2_15_R1_B_scaffold_1165_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6437..7477
DNA (1041bp) protein (347aa)
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000256|RuleBase:RU361139}; EC=1.2.4.1 {ECO:0000256|RuleBase:RU361139};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
pyruvate dehydrogenase E1 subunit alpha n=1 Tax=Hoeflea sp. 108 RepID=UPI00036F2528
pyruvate dehydrogenase E1 alpha subunit
SCN18_26_2_15_R1_B_scaffold_1165_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7577..8968
DNA (1392bp) protein (464aa)
Pyruvate dehydrogenase subunit beta {ECO:0000313|EMBL:ESZ24929.1}; EC=1.2.4.1 {ECO:0000313|EMBL:ESZ24929.1};; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
UPI0003CFF36F related cluster n=1 Tax=unknown RepID=UPI0003CFF36F
transketolase
SCN18_26_2_15_R1_B_scaffold_1165_9
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8983..9606
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI0003773532
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF91923.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
SCN18_26_2_15_R1_B_scaffold_1165_10
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9607..10962
DNA (1356bp) protein (452aa)
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
branched-chain alpha-keto acid dehydrogenase subunit E2 n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003083E34
branched-chain alpha-keto acid dehydrogenase E2
SCN18_26_2_15_R1_B_scaffold_1165_11
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10990..11532
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C4X1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM76873.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1165_12
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11534..12193
DNA (660bp) protein (220aa)
arylesterase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F75D80
G-D-S-L family lipolytic protein {ECO:0000313|EMBL:EHK54971.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
arylesterase
SCN18_26_2_15_R1_B_scaffold_1165_13
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12206..13651
DNA (1446bp) protein (482aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98MY4_RHILO
SCN18_26_2_15_R1_B_scaffold_1165_14
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13732..13989
DNA (258bp) protein (86aa)
Membrane protein n=5 Tax=Mesorhizobium RepID=V7EYR3_9RHIZ
Membrane protein {ECO:0000313|EMBL:ESZ48045.1}; TaxID=1287100 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C054A000.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_1165_15
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14237..15199
DNA (963bp) protein (321aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
lipoic acid synthetase (EC:2.8.1.8)
Lipoyl synthase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ERC6_9RHIZ
SCN18_26_2_15_R1_B_scaffold_1165_16
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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15212..15670
DNA (459bp) protein (153aa)
Cyclase/dehydrase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HWD3_9RHIZ
Cyclase/dehydrase {ECO:0000313|EMBL:EHK54976.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
cyclase/dehydrase
SCN18_26_2_15_R1_B_scaffold_1165_17
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15695..16186)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EQ36_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EZQ12669.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
CinA domain-containing protein
SCN18_26_2_15_R1_B_scaffold_1165_18
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16186..17397)
DNA (1212bp) protein (404aa)
Bifunctional enzyme IspD/IspF n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ES58_9RHIZ
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
SCN18_26_2_15_R1_B_scaffold_1165_19
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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17604..18557
DNA (954bp) protein (318aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
tRNA-dihydrouridine synthase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FBD5_9RHIZ
nitrogen reguration protein nifR3 protein
SCN18_26_2_15_R1_B_scaffold_1165_20
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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18554..19690
DNA (1137bp) protein (379aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
Nitrogen reguration protein NirB n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98MX7_RHILO
nitrogen reguration protein nirB protein
SCN18_26_2_15_R1_B_scaffold_1165_21
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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19687..21147
DNA (1461bp) protein (487aa)
chemotaxis protein CheY n=1 Tax=Hoeflea sp. 108 RepID=UPI00036E7B69
Chemotaxis protein CheY {ECO:0000313|EMBL:ESZ24918.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
nitrogen regulation protein NR(I)
SCN18_26_2_15_R1_B_scaffold_1165_22
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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21277..23541
DNA (2265bp) protein (755aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
Nitrogen regulation protein ntrY n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FL03_9RHIZ
PAS domain S-box
SCN18_26_2_15_R1_B_scaffold_1165_23
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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23543..24904
DNA (1362bp) protein (454aa)
Sigma-54 factor interaction domain-containing protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HWE0_9RHIZ
Sigma-54 factor interaction domain-containing protein {ECO:0000313|EMBL:EHK54983.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
SCN18_26_2_15_R1_B_scaffold_1165_24
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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25049..25912
DNA (864bp) protein (288aa)
Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VD10_9RHIZ
Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase {ECO:0000313|EMBL:EJM97804.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
class IV aminotransferase
SCN18_26_2_15_R1_B_scaffold_1165_25
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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26048..26296
DNA (249bp) protein (83aa)
RNA-binding protein Hfq n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HWE4_9RHIZ
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hfq; RNA-binding protein Hfq
SCN18_26_2_15_R1_B_scaffold_1165_26
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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26425..27666
DNA (1242bp) protein (414aa)
UPI0003CEB440 related cluster n=1 Tax=unknown RepID=UPI0003CEB440
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1287281 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC405B00.;"
GTP binding protein-like
SCN18_26_2_15_R1_B_scaffold_1165_27
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(27694..28392)
DNA (699bp) protein (233aa)
Nucleoside triphosphate pyrophosphohydrolase n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7H1H9_9RHIZ
MazG family protein
MazG family protein {ECO:0000313|EMBL:AGB46504.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
Displaying 27 items

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