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SCN18_30_10_14_R2_B_scaffold_2047

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_2047_1
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..604
DNA (603bp) protein (201aa)
O-acetylhomoserine/O-acetylserine sulfhydrylase (EC:2.5.1.49)
O-acetylhomoserine/O-acetylserine sulfhydrylase n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WQL8_RHOS5
O-succinylhomoserine sulfhydrylase {ECO:0000313|EMBL:GAN77387.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCN18_30_10_14_R2_B_scaffold_2047_2
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

776..1327
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000309FEB0
Oxidoreductase {ECO:0000313|EMBL:EHM03355.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
short-chain dehydrogenase/reductase SDR
SCN18_30_10_14_R2_B_scaffold_2047_3
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1315..2697)
DNA (1383bp) protein (461aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Thermincola potens (strain JR) RepID=D5XB81_THEPJ
Uncharacterized protein {ECO:0000313|EMBL:ETR75856.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
EmrB/QacA subfamily drug resistance transporter
SCN18_30_10_14_R2_B_scaffold_2047_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2837..3820
DNA (984bp) protein (328aa)
Phenylacetate-CoA oxygenase, PaaG subunit n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IKF4_METNO
Phenylacetate-CoA oxygenase subunit PaaA/PaaG {ECO:0000313|EMBL:GAN77741.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
paaA; phenylacetate-CoA oxygenase subunit PaaA
SCN18_30_10_14_R2_B_scaffold_2047_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3824..4111
DNA (288bp) protein (96aa)
phenylacetate-CoA oxygenase subunit PaaB n=1 Tax=Roseomonas sp. B5 RepID=UPI0002DA2ADB
paaB; phenylacetate-CoA oxygenase subunit PaaB
Phenylacetate-CoA oxygenase, PaaH subunit {ECO:0000313|EMBL:ABS66148.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCN18_30_10_14_R2_B_scaffold_2047_6
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4122..4892
DNA (771bp) protein (257aa)
phenylacetic acid degradation protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00030B4B83
1,2-phenylacetyl-CoA epoxidase, subunit C {ECO:0000313|EMBL:KDM65787.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
paaI; phenylacetate-CoA oxygenase PaaI subunit
SCN18_30_10_14_R2_B_scaffold_2047_7
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4886..5374
DNA (489bp) protein (163aa)
Phenylacetate-CoA oxygenase, PaaJ subunit n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2ITX7_RHOP2
phenylacetate-CoA oxygenase, PaaJ subunit
Phenylacetate-CoA oxygenase, PaaJ subunit {ECO:0000313|EMBL:ABD08333.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCN18_30_10_14_R2_B_scaffold_2047_8
unknown

Not on your lists

5445..6011
DNA (567bp) protein (189aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_2047_9
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6138..6965
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003680AA0
Uncharacterized protein {ECO:0000313|EMBL:KJV10929.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
UspA; Universal stress protein UspA
SCN18_30_10_14_R2_B_scaffold_2047_10
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7176..9458
DNA (2283bp) protein (761aa)
Glycosyl transferase group 1 n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CMB3_VARPS
glycosyl transferases group 1 family protein
Glycosyl transferases group 1 family protein {ECO:0000313|EMBL:AIO49818.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
SCN18_30_10_14_R2_B_scaffold_2047_11
unknown

Not on your lists

9490..9846
DNA (357bp) protein (119aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_2047_12
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

Not on your lists

9854..11104
DNA (1251bp) protein (417aa)
Glycosyl transferase group 1 n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CMB2_VARPS
Putative Glycosyl transferase group 1 {ECO:0000313|EMBL:CDX34981.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
glycosyl transferases group 1 family protein
SCN18_30_10_14_R2_B_scaffold_2047_13
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11114..11368)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A8N0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EHL95504.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2047_14
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11432..12187)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036E5159
Uncharacterized protein {ECO:0000313|EMBL:KJC61310.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
sulfate-transporting ATPase
SCN18_30_10_14_R2_B_scaffold_2047_15
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12168..13910)
DNA (1743bp) protein (581aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002E6381D
Uncharacterized protein {ECO:0000313|EMBL:KJC61179.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
ABC transporter
SCN18_30_10_14_R2_B_scaffold_2047_16
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13907..14767)
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036772A0
Uncharacterized protein {ECO:0000313|EMBL:KJC53026.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
high-affinity branched-chain amino acid transport system permease
SCN18_30_10_14_R2_B_scaffold_2047_17
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14761..15999)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IL56_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF83349.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2047_18
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16215..16664
DNA (450bp) protein (150aa)
SCN18_30_10_14_R2_B_scaffold_2047_19
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16746..17519
DNA (774bp) protein (258aa)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TMC2_9PROT
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase {ECO:0000313|EMBL:EDP65725.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
putative aldolase
SCN18_30_10_14_R2_B_scaffold_2047_20
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17588..18745
DNA (1158bp) protein (386aa)
Extracellular ligand-binding receptor n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8ILH3_METNO
LivK protein {ECO:0000313|EMBL:BAQ49456.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
extracellular ligand-binding receptor
SCN18_30_10_14_R2_B_scaffold_2047_21
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18818..19864
DNA (1047bp) protein (349aa)
Inner-membrane translocator n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07K10_RHOP5
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ABJ07724.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCN18_30_10_14_R2_B_scaffold_2047_22
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19861..21447
DNA (1587bp) protein (529aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F753AE
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EHM02597.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
branched-chain amino acid transport system / permease component family protein
SCN18_30_10_14_R2_B_scaffold_2047_23
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21447..21539
DNA (93bp) protein (31aa)
metal-dependent hydrolase n=1 Tax=Bordetella sp. FB-8 RepID=UPI00036E9256
SCN18_30_10_14_R2_B_scaffold_2047_24
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21536..22258
DNA (723bp) protein (241aa)
metal-dependent hydrolase n=1 Tax=Burkholderia ubonensis RepID=UPI00016A6B3D
Metal-dependent hydrolase {ECO:0000313|EMBL:KHL14736.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
ABC transporter-like protein
SCN18_30_10_14_R2_B_scaffold_2047_25
unknown

Not on your lists

comp(22275..22475)
DNA (201bp) protein (67aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_2047_26
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22570..23304)
DNA (735bp) protein (245aa)
aquaporin Z n=1 Tax=Roseomonas sp. B5 RepID=UPI0003043B81
Glycerol uptake facilitator {ECO:0000313|EMBL:GAN76241.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
aqpZ; aquaporin
SCN18_30_10_14_R2_B_scaffold_2047_27
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23496..24122
DNA (627bp) protein (209aa)
cysteine hydrolase n=1 Tax=Methylobacterium sp. MB200 RepID=UPI00034A3EA6
Cysteine hydrolase {ECO:0000313|EMBL:KGM35751.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
isochorismatase hydrolase
SCN18_30_10_14_R2_B_scaffold_2047_28
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24209..25450)
DNA (1242bp) protein (414aa)
Putative substrate-binding protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IDX0_METNO
putative substrate-binding protein
Putative substrate-binding protein {ECO:0000313|EMBL:ACL55692.1}; Flags: Precursor;; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCN18_30_10_14_R2_B_scaffold_2047_29
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25538..25864)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A481_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAN77748.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2047_30
Chlorobium chlorochromatii, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

25962..26180
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=1 Tax=Chlorobium chlorochromatii (strain CaD3) RepID=Q3AQ99_CHLCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB28826.1}; TaxID=340177 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium chlorochromatii (strain CaD3).;"
Displaying items 1-30 of 35 in total

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