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SCN18_30_10_14_R2_B_scaffold_2080

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_2080_1
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55..435
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GQ68_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KJC35676.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
Glyoxalase/bleomycin resistance protein/dioxygenase
SCN18_30_10_14_R2_B_scaffold_2080_2
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(553..1326)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZFU8_AZOL4
Uncharacterized protein {ECO:0000313|EMBL:KJB91554.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2080_3
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1347..1787)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZGT9_AZOL4
Membrane protein {ECO:0000313|EMBL:KJR63694.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2080_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1802..2164)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ARU0_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:KJB90470.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2080_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2282..3274)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RSP7_ALLVD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIB14743.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
SCN18_30_10_14_R2_B_scaffold_2080_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3441..4241
DNA (801bp) protein (267aa)
3-oxoacyl-ACP reductase id=4063269 bin=GWC2_Syntrophus__56_31 species=Mesorhizobium sp. STM 4661 genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
short-chain dehydrogenase/reductase SDR
Tax=GWC2_Syntrophus_56_31_curated
SCN18_30_10_14_R2_B_scaffold_2080_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4254..4811
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TTT6_9BRAD
Cation/multidrug efflux pump
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
SCN18_30_10_14_R2_B_scaffold_2080_8
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4964..6271)
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00037724F2
Na+/H+ antiporter NhaD-like permease {ECO:0000313|EMBL:EIM28393.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
citrate transporter
SCN18_30_10_14_R2_B_scaffold_2080_9
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(6275..7522)
DNA (1248bp) protein (416aa)
MFS transporter n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003637031
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADP72059.1}; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 /; LMG 4299).;"
SCN18_30_10_14_R2_B_scaffold_2080_10
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7664..8674
DNA (1011bp) protein (337aa)
Putative dehydrogenase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YS09_9RHIZ
Putative dehydrogenase {ECO:0000313|EMBL:EIM26751.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
oxidoreductase protein
SCN18_30_10_14_R2_B_scaffold_2080_11
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8688..9167
DNA (480bp) protein (160aa)
Competence/damage-inducible protein CinA n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P7B6_9BRAD
Competence/damage-inducible protein CinA {ECO:0000313|EMBL:EKS36649.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
competence-damaged inducible protein
SCN18_30_10_14_R2_B_scaffold_2080_12
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9189..10067)
DNA (879bp) protein (293aa)
Lipase/acylhydrolase family protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BTT4_GRABC
Lipase/Acylhydrolase family protein
Lipase/acylhydrolase family protein {ECO:0000313|EMBL:ABI61768.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCN18_30_10_14_R2_B_scaffold_2080_13
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10064..11083)
DNA (1020bp) protein (340aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Burkholderia cenocepacia (strain MC0-3) RepID=B1KCJ8_BURCC
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:GAN78312.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
L-carnitine dehydratase/bile acid-inducible protein F
SCN18_30_10_14_R2_B_scaffold_2080_14
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11211..12053)
DNA (843bp) protein (281aa)
undecaprenyl pyrophosphate phosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase {ECO:0000255|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000255|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000255|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000255|HAMAP-Rule:MF_01006}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
Undecaprenyl-diphosphatase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=UPPP_GRABC
SCN18_30_10_14_R2_B_scaffold_2080_15
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12218..13318)
DNA (1101bp) protein (367aa)
D-alanine--D-alanine ligase n=1 Tax=Acetobacter aceti RepID=UPI000226089D
D-alanine--D-alanine ligase {ECO:0000313|EMBL:GAN57106.1}; TaxID=887700 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; Acetobacter subgen. Acetobacter.;" source="Acetobacter aceti NBRC 14818.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2080_16
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13315..13893)
DNA (579bp) protein (193aa)
Uncharacterized membrane-associated protein-like protein n=3 Tax=Acidiphilium RepID=A5G336_ACICJ
hypothetical protein
Uncharacterized membrane-associated protein-like protein {ECO:0000313|EMBL:ABQ32268.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
SCN18_30_10_14_R2_B_scaffold_2080_17
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14089..15030
DNA (942bp) protein (314aa)
Cation diffusion facilitator family transporter n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YM84_9PROT
Cation efflux protein {ECO:0000313|EMBL:GAN78453.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
cation diffusion facilitator transporter family protein
SCN18_30_10_14_R2_B_scaffold_2080_18
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15044..15796
DNA (753bp) protein (251aa)
fabG; 3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:BAC48012.1}; EC=1.1.1.100 {ECO:0000313|EMBL:BAC48012.1};; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89RL6_BRADU
SCN18_30_10_14_R2_B_scaffold_2080_19
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15883..16035
DNA (153bp) protein (51aa)
Uncharacterized protein {ECO:0000313|EMBL:GAN78187.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
entericidin EcnAB
SCN18_30_10_14_R2_B_scaffold_2080_20
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16032..17126)
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Herbaspirillum lusitanum RepID=UPI000309AF5C
Uncharacterized protein {ECO:0000313|EMBL:KGM34166.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
oxidoreductase
SCN18_30_10_14_R2_B_scaffold_2080_21
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17207..17974
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V836_SPHWW
Uncharacterized protein {ECO:0000313|EMBL:ETX02580.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2080_22
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17980..19251)
DNA (1272bp) protein (424aa)
CinA-like protein id=4532703 bin=GWF2_Methylomirabilis_70_14 species=Shewanella sediminis genus=Shewanella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
competence/damage-inducible protein cinA
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
SCN18_30_10_14_R2_B_scaffold_2080_23
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19256..20239)
DNA (984bp) protein (328aa)
Putative dioxygenase, 2OG-Fe(II) oxygenase superfamily protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TMT8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:ETX02243.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
2OG-Fe(II) oxygenase superfamily protein
SCN18_30_10_14_R2_B_scaffold_2080_24
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20397..22112
DNA (1716bp) protein (572aa)
Amidohydrolase 3 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWK5_PARL1
amidohydrolase 3
Amidohydrolase 3 {ECO:0000313|EMBL:ABS64288.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCN18_30_10_14_R2_B_scaffold_2080_25
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22234..23457)
DNA (1224bp) protein (408aa)
Putative ABC branched-chain amino transporter, periplasmic binding protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMI8_TISMK
ABC transporter permease {ECO:0000313|EMBL:KJV09198.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
putative ABC branched-chain amino transporter, periplasmic binding protein
SCN18_30_10_14_R2_B_scaffold_2080_26
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23640..25397
DNA (1758bp) protein (586aa)
cya3; adenylate cyclase (EC:4.6.1.1)
Putative integral membrane protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QAT3_9BRAD
Putative integral membrane protein {ECO:0000313|EMBL:EIG56889.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
SCN18_30_10_14_R2_B_scaffold_2080_27
unknown

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25544..25738
DNA (195bp) protein (65aa)

This feature has no annotations

Displaying 27 items

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