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SCN18_30_10_14_R2_B_scaffold_2814

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_2814_1
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..780
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Corynebacterium sp. KPL1824 RepID=U7KZW6_9CORY
Metalloproteinase, extracellular matrix glycoprotein VMP28 {ECO:0000313|EMBL:EFJ45678.1}; TaxID=3067 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Volvox.;" source="Volvox carteri (Green alga).;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2814_2
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1197..1904)
DNA (708bp) protein (236aa)
Transcriptional regulator, TetR family n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H1F3_CAUCN
TetR-family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AAK22757.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
SCN18_30_10_14_R2_B_scaffold_2814_3
unknown

Not on your lists

comp(1924..2136)
DNA (213bp) protein (71aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_2814_4
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2232..3095)
DNA (864bp) protein (288aa)
Chemotaxis protein MotA n=2 Tax=Acidiphilium RepID=F0J0D0_ACIMA
Flagellar motor chemotaxis protein MotA {ECO:0000313|EMBL:GAN78238.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
motA; chemotaxis protein MotA
SCN18_30_10_14_R2_B_scaffold_2814_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3106..4233)
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002D57635
motB; chemotaxis protein MotB
OmpA/MotB domain-containing protein {ECO:0000313|EMBL:EGO94431.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
SCN18_30_10_14_R2_B_scaffold_2814_6
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4289..5767)
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A3Y6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EHL98676.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
putative 4-amino-4-deoxy-L-arabinose transferase
SCN18_30_10_14_R2_B_scaffold_2814_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5764..6900)
DNA (1137bp) protein (379aa)
Undecaprenyl-phosphate mannosyltransferase (EC:2.7.8.-)
Undecaprenyl-phosphate mannosyltransferase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BS40_GRABC
Dolichol-phosphate mannosyltransferase {ECO:0000313|EMBL:GAN76670.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCN18_30_10_14_R2_B_scaffold_2814_8
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7116..7622)
DNA (507bp) protein (169aa)
Transcriptional regulator, AsnC family n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BU83_GRABC
Transcriptional regulator, AsnC family protein
Transcriptional regulator, AsnC family protein {ECO:0000313|EMBL:AHJ62516.1}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
SCN18_30_10_14_R2_B_scaffold_2814_9
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7654..8658
DNA (1005bp) protein (335aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
trxB1; thioredoxin reductase (EC:1.8.1.9)
Thioredoxin reductase n=1 Tax=Oceanibaculum indicum P24 RepID=K2KMY6_9PROT
SCN18_30_10_14_R2_B_scaffold_2814_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8933..9817
DNA (885bp) protein (295aa)
Transcriptional regulators, LysR family n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BU85_GRABC
Transcriptional regulator LysR {ECO:0000313|EMBL:GAN76673.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
LysR family transcriptional regulator
SCN18_30_10_14_R2_B_scaffold_2814_11
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10172..10468
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QHD2_RALPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW90444.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
SCN18_30_10_14_R2_B_scaffold_2814_12
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10469..10999)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YXK0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM28692.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2814_13
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10996..12165)
DNA (1170bp) protein (390aa)
alcohol dehydrogenase n=1 Tax=Burkholderia bryophila RepID=UPI00036FE345
alcohol dehydrogenase GroES domain-containing protein
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ADX58732.1}; TaxID=640510 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. CCGE1001.;"
SCN18_30_10_14_R2_B_scaffold_2814_14
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12240..13679)
DNA (1440bp) protein (480aa)
Tyrosine decarboxylase (EC:4.1.1.25)
Tyrosine decarboxylase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BU86_GRABC
Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
SCN18_30_10_14_R2_B_scaffold_2814_15
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13688..14776)
DNA (1089bp) protein (363aa)
Endo-1,4-beta-D-glucanase {ECO:0000313|EMBL:ABE60666.1}; EC=3.2.1.4 {ECO:0000313|EMBL:ABE60666.1};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Endo-1,4-beta-D-glucanase n=1 Tax=uncultured bacterium RepID=Q1NZ59_9BACT
glycoside hydrolase
SCN18_30_10_14_R2_B_scaffold_2814_16
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14879..15409)
DNA (531bp) protein (177aa)
Toxin-antitoxin system, toxin component, GNAT domain protein {ECO:0000313|EMBL:EFH12850.1}; EC=2.3.1.- {ECO:0000313|EMBL:EFH12850.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003707EB8
N-acetyltransferase GCN5
SCN18_30_10_14_R2_B_scaffold_2814_17
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15370..16575)
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036AC569
Aspartate aminotransferase {ECO:0000313|EMBL:GAN78170.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
aspartate aminotransferase
SCN18_30_10_14_R2_B_scaffold_2814_18
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16583..17785)
DNA (1203bp) protein (401aa)
aatA; aspartate aminotransferase (EC:2.6.1.-)
Aminotransferase, class I and II n=1 Tax=Acidiphilium sp. PM RepID=F7SA05_9PROT
Aspartate aminotransferase {ECO:0000313|EMBL:GAN78169.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCN18_30_10_14_R2_B_scaffold_2814_19
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17829..18638)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037DA74A
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:KKB84349.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
spermidine/putrescine ABC transporter permease II
Displaying 19 items

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