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SCN18_30_10_14_R2_B_scaffold_317

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_317_1
unknown

Not on your lists

comp(1..69)
DNA (69bp) protein (23aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_317_2
unknown

Not on your lists

comp(185..535)
DNA (351bp) protein (117aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_317_3
unknown

Not on your lists

comp(633..797)
DNA (165bp) protein (55aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_317_4
unknown

Not on your lists

comp(766..1344)
DNA (579bp) protein (193aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_317_5
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1473..1847
DNA (375bp) protein (125aa)
Gll3860 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NEL9_GLOVI
hypothetical protein
Gll3860 protein {ECO:0000313|EMBL:BAC91801.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
SCN18_30_10_14_R2_B_scaffold_317_trna_1
unknown

Not on your lists

1955..2041
DNA (87bp)
transferRNA Ser
SCN18_30_10_14_R2_B_scaffold_317_6
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2545..3825
DNA (1281bp) protein (427aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
6-phosphofructokinase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A1F5DA
phosphofructokinase
SCN18_30_10_14_R2_B_scaffold_317_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3872..4573)
DNA (702bp) protein (234aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T7M4_CAUSK
Transcriptional regulator cAMP-binding AadR/Crp/Fnr {ECO:0000313|EMBL:GAN77229.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
fixK; transcriptional regulator FixK
SCN18_30_10_14_R2_B_scaffold_317_8
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4676..5311
DNA (636bp) protein (212aa)
chemotaxis protein CheY n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI000368DA0B
Response regulator FixJ {ECO:0000313|EMBL:EJZ32616.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
fixJ; transcriptional regulatory protein FixJ
SCN18_30_10_14_R2_B_scaffold_317_9
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5301..6815
DNA (1515bp) protein (505aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000375EAE6
PAS/PAC sensor signal transduction histidine kinase
SCN18_30_10_14_R2_B_scaffold_317_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6917..7282
DNA (366bp) protein (122aa)
Two-component response regulator n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GCE9_9BRAD
Response regulator receiver {ECO:0000313|EMBL:GAN77226.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
response regulator receiver
SCN18_30_10_14_R2_B_scaffold_317_11
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7380..8477
DNA (1098bp) protein (366aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EQK0_METSB
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACK52213.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCN18_30_10_14_R2_B_scaffold_317_12
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8481..11654
DNA (3174bp) protein (1058aa)
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IIA4_BEII9
hydrophobe/amphiphile efflux-1 (HAE1) family protein
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family {ECO:0000313|EMBL:ACB96058.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCN18_30_10_14_R2_B_scaffold_317_13
unknown

Not on your lists

11651..11809
DNA (159bp) protein (53aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_317_14
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11847..12698)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AJ43_AZOBR
Polyphosphate kinase {ECO:0000313|EMBL:KJB92970.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
conserved hypothetical protein; putative Polyphosphate kinase domain
SCN18_30_10_14_R2_B_scaffold_317_15
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12722..13228)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RUE3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EFH09076.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_317_16
scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, Mobile_element

Not on your lists

comp(13341..14591)
DNA (1251bp) protein (417aa)
patatin n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B649E2
lipid acyl hydrolase, patatin-like domain
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R2_B_scaffold_317_17
CN-SCN_Erythrobacter_14x, CN-SCN_Erythrobacter_14x, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14588..15784)
DNA (1197bp) protein (399aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1283331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter vinelandii CA6.;"
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI0002FA36AC
ackA-3; acetate kinase
SCN18_30_10_14_R2_B_scaffold_317_18
SCNPILOT_CONT_1000_P_Legionella_39_23, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15804..16349)
DNA (546bp) protein (182aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=758796 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. RPE67.;"
enoyl-ACP reductase n=1 Tax=Methylocystis parvus RepID=UPI00031A685F
short-chain dehydrogenase/reductase
SCN18_30_10_14_R2_B_scaffold_317_19
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16342..17553)
DNA (1212bp) protein (404aa)
Phosphate butyryltransferase {ECO:0000313|EMBL:ACA16070.1}; EC=2.3.1.19 {ECO:0000313|EMBL:ACA16070.1};; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
Phosphate butyryltransferase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UMD1_METS4
phosphate butyryltransferase
SCN18_30_10_14_R2_B_scaffold_317_20
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17546..19720)
DNA (2175bp) protein (725aa)
Uncharacterized protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ERT2_METSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK51630.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCN18_30_10_14_R2_B_scaffold_317_21
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19926..21422
DNA (1497bp) protein (499aa)
hypothetical protein n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI0002E4ADAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF08576.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
SCN18_30_10_14_R2_B_scaffold_317_22
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21423..22379
DNA (957bp) protein (319aa)
Putative uncharacterized protein n=1 Tax=Thiocapsa marina 5811 RepID=F9U5M2_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EGV20445.1}; Flags: Precursor;; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_317_23
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22415..22699)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AJ51_AZOBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIB11470.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
SCN18_30_10_14_R2_B_scaffold_317_24
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22717..23109)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AJ52_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:KJB92962.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_317_25
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23329..25734
DNA (2406bp) protein (802aa)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
putative phosphoketolase (EC:4.1.2.9)
Probable phosphoketolase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WV18_9BRAD
SCN18_30_10_14_R2_B_scaffold_317_26
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25765..26493
DNA (729bp) protein (243aa)
HAD family hydrolase n=1 Tax=Methylobacterium sp. MB200 RepID=UPI00035F9A50
HAD family hydrolase
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:ABY28467.1}; TaxID=419610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain PA1).;"
SCN18_30_10_14_R2_B_scaffold_317_27
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26486..28771
DNA (2286bp) protein (762aa)
Kojibiose phosphorylase (EC:2.4.1.230)
Kojibiose phosphorylase {ECO:0000313|EMBL:ACK82166.1}; EC=2.4.1.230 {ECO:0000313|EMBL:ACK82166.1};; TaxID=440085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain CM4 / NCIMB 13688); (Methylobacterium chloromethanicum).;"
kojibiose phosphorylase n=1 Tax=Methylobacterium sp. MB200 RepID=UPI00034CB51F
SCN18_30_10_14_R2_B_scaffold_317_28
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28808..30028
DNA (1221bp) protein (407aa)
Transporter, major facilitator family protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RGW2_9PROT
major Facilitator Superfamily protein
Major facilitator superfamily transporter {ECO:0000313|EMBL:GAN78204.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCN18_30_10_14_R2_B_scaffold_317_29
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30054..32552
DNA (2499bp) protein (833aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
Phosphorylase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AGT3_AZOBR
maltodextrin phosphorylase
Displaying items 1-30 of 85 in total

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