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SCN18_30_10_14_R2_B_scaffold_630

Search features with annotation key words

Displaying items 1-30 of 101 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_630_1
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75..1241)
DNA (1167bp) protein (389aa)
ABC-type branched-chain amino acid transport system, periplasmic component id=4288064 bin=GWF2_Methylomirabilis_70_14 species=Idiomarina sp. A28L genus=Idiomarina taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Extracellular ligand-binding receptor
Tax=GWA2_Rokubacteria_70_23_curated
SCN18_30_10_14_R2_B_scaffold_630_2
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

1359..2903
DNA (1545bp) protein (515aa)
AMP-binding enzyme id=2306571 bin=GWA2_Methylomirabilis_73_35 species=Acetobacteraceae bacterium AT-5844 genus=unknown taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acetyl-CoA synthetase
Tax=GWA2_Rokubacteria_73_35_curated
SCN18_30_10_14_R2_B_scaffold_630_3
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2903..4042
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZWG8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EHM02616.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_630_4
CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, Eukaryote

Not on your lists

comp(4058..5491)
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Caenorhabditis japonica RepID=H2WNV3_CAEJA
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:CJA18316}; TaxID=281687 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.;" source="Caenorhabditis japonica.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_630_5
CG_Cyano_02, Cyanobacteria, Bacteria

Not on your lists

comp(5987..6796)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI000362F9C7
hypothetical protein
Tax=CG_Cyano_02
SCN18_30_10_14_R2_B_scaffold_630_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6896..8176)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0K1J8_9SPHN
Luciferase {ECO:0000313|EMBL:ETR78304.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
luciferase family protein
SCN18_30_10_14_R2_B_scaffold_630_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8299..8994
DNA (696bp) protein (232aa)
Short-chain dehydrogenase/reductase n=2 Tax=Burkholderia RepID=I5CXY9_9BURK
uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:BAO91283.1}; TaxID=758796 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. RPE67.;"
SCN18_30_10_14_R2_B_scaffold_630_8
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9075..9764)
DNA (690bp) protein (230aa)
Nitroreductase family protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HRQ8_RUBGI
NfnB protein {ECO:0000313|EMBL:BAQ45026.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
nitroreductase family protein
SCN18_30_10_14_R2_B_scaffold_630_9
unknown

Not on your lists

9933..10274
DNA (342bp) protein (114aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_630_10
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10681..11892)
DNA (1212bp) protein (404aa)
Putative calcium-binding protein n=1 Tax=Caulobacter sp. AP07 RepID=J3A239_9CAUL
Putative calcium-binding protein {ECO:0000313|EMBL:EJL25606.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
putative pectin lyase
SCN18_30_10_14_R2_B_scaffold_630_11
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12109..13161
DNA (1053bp) protein (351aa)
Putative D-3-phosphoglycerate dehydrogenase (PGDH) {ECO:0000313|EMBL:CCE02535.1}; EC=1.1.1.95 {ECO:0000313|EMBL:CCE02535.1};; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
D-3-phosphoglycerate dehydrogenase (PGDH) (EC:1.1.1.95)
Putative D-3-phosphoglycerate dehydrogenase (PGDH) n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T7V8_9BRAD
SCN18_30_10_14_R2_B_scaffold_630_12
SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13246..14253
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9ADV6_RHIFH
hypothetical protein
ABC transporter, substrate-binding protein {ECO:0000313|EMBL:CEO91788.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
SCN18_30_10_14_R2_B_scaffold_630_13
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14253..15065
DNA (813bp) protein (271aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YV68_9RHIZ
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component {ECO:0000313|EMBL:EIM27860.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
ssuB; putative ATP-binding component of ABC transporters
SCN18_30_10_14_R2_B_scaffold_630_14
SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15065..15838
DNA (774bp) protein (258aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YV67_9RHIZ
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:EIM27859.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_630_15
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15846..16499
DNA (654bp) protein (218aa)
MAPEG family n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IH12_9BURK
MAPEG family {ECO:0000313|EMBL:EIF30014.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. Ch1-1.;"
MAPEG family protein
SCN18_30_10_14_R2_B_scaffold_630_16
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16534..17190
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PDQ3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36483.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
glutathione S transferase protein
SCN18_30_10_14_R2_B_scaffold_630_17
SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, Verrucomicrobia

Not on your lists

17322..18845
DNA (1524bp) protein (508aa)
Uncharacterized protein n=2 Tax=Cyanothece RepID=B7JUS5_CYAP8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK65619.1}; Flags: Precursor;; TaxID=41431 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 8801) (Synechococcus sp. (strain PCC 8801 /; RF-1)).;"
SCN18_30_10_14_R2_B_scaffold_630_18
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18911..19948)
DNA (1038bp) protein (346aa)
Putative Metallo-hydrolase/oxidoreductase superfamily protein Beta-lactamase-like n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0TB96_9BRAD
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48894.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative metallo-hydrolase/oxidoreductase superfamily protein
SCN18_30_10_14_R2_B_scaffold_630_19
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19998..21047
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI00035D4973
C4-dicarboxylate transporter
C4-dicarboxylate transporter/malic acid transport protein {ECO:0000313|EMBL:KCV66705.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
SCN18_30_10_14_R2_B_scaffold_630_20
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21115..21528
DNA (414bp) protein (138aa)
Bll7906 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89C91_BRADU
ferredoxin
Uncharacterized protein {ECO:0000313|EMBL:KGJ64190.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
SCN18_30_10_14_R2_B_scaffold_630_21
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21533..22291
DNA (759bp) protein (253aa)
Short chain dehydrogenase n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z6B9_9GAMM
dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
SCN18_30_10_14_R2_B_scaffold_630_22
CN-SCN_Acidovorax_22x, CN-SCN_Acidovorax_22x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22393..23403
DNA (1011bp) protein (337aa)
Putative lipopolysaccharide modification acyltransferase n=1 Tax=Gluconobacter morbifer G707 RepID=G6XGE4_9PROT
putative acyltransferase
Putative acyltransferase {ECO:0000313|EMBL:AHK71843.1}; TaxID=1288313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconobacter.;" source="Gluconobacter oxydans DSM 3504.;"
SCN18_30_10_14_R2_B_scaffold_630_23
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23416..24618
DNA (1203bp) protein (401aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J2A3_RHOP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD05407.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCN18_30_10_14_R2_B_scaffold_630_24
unknown

Not on your lists

24707..25177
DNA (471bp) protein (157aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_630_25
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25282..26679
DNA (1398bp) protein (466aa)
Tricarballylate dehydrogenase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YKR0_9PROT
Tricarballylate dehydrogenase {ECO:0000313|EMBL:EKM99461.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
tricarballylate dehydrogenase
SCN18_30_10_14_R2_B_scaffold_630_26
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26666..27769
DNA (1104bp) protein (368aa)
Citrate utilization protein B n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YXE9_9PROT
Citrate CoA transferase subunit alpha {ECO:0000313|EMBL:GAN80764.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
ferredoxin
SCN18_30_10_14_R2_B_scaffold_630_27
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27775..28359)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z5S7_AZOL4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBS86271.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
SCN18_30_10_14_R2_B_scaffold_630_28
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28383..28913)
DNA (531bp) protein (177aa)
Transcription termination/antitermination protein NusG n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BQG3_GRABC
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
Transcription antitermination protein nusG
SCN18_30_10_14_R2_B_scaffold_630_29
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28926..29120)
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003630202
preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
SCN18_30_10_14_R2_B_scaffold_630_trna_5
unknown

Not on your lists

comp(29208..29281)
DNA (74bp)
transferRNA Trp
Displaying items 1-30 of 101 in total

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