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SCN18_30_10_14_R2_B_scaffold_1207

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1207_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(256..1809)
DNA (1554bp) protein (518aa)
Extracellular solute-binding protein, family 5 n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AWN9_AZOBR
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AIB15768.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
SCN18_30_10_14_R2_B_scaffold_1207_2
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2025..5183
DNA (3159bp) protein (1053aa)
Multidrug ABC transporter n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BH26_9RHIZ
Cation efflux system protein CzcA {ECO:0000313|EMBL:CEG10553.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
multidrug ABC transporter
SCN18_30_10_14_R2_B_scaffold_1207_3
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5365..5679
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000380B4DC
Uncharacterized protein {ECO:0000313|EMBL:KDA00938.1}; TaxID=1280953 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas oceanitis SCH89.;"
SCN18_30_10_14_R2_B_scaffold_1207_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5708..6415
DNA (708bp) protein (236aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Caulobacter crescentus OR37 RepID=R0EEQ0_CAUCE
Heavy metal response regulator {ECO:0000313|EMBL:KFZ89828.1}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
two-component response regulator
SCN18_30_10_14_R2_B_scaffold_1207_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6417..7781
DNA (1365bp) protein (455aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
Signal transduction histidine kinase n=1 Tax=Caulobacter crescentus OR37 RepID=R0EPZ1_CAUCE
two-component sensor histidine kinase; putative heavy-metal sensor (Cu/Zn)
SCN18_30_10_14_R2_B_scaffold_1207_6
SCNpilot_BF_INOC_Mobile_elements_62_12, SCNpilot_BF_INOC_Mobile_elements_62_12, SCNpilot_BF_INOC_Mobile_elements_62_12, SCNpilot_BF_INOC_Mobile_elements_62_12, SCNpilot_BF_INOC_Mobile_elements_62_12, Plasmid-like

Not on your lists

comp(7774..8160)
DNA (387bp) protein (129aa)
TniB family protein n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6W5J8_9MICO
TniB {ECO:0000313|EMBL:KGJ16606.1}; TaxID=1525718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 39524.;"
TniB family protein
SCN18_30_10_14_R2_B_scaffold_1207_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8562..8891
DNA (330bp) protein (110aa)
ArsR family transcriptional regulator n=1 Tax=Afipia birgiae RepID=UPI00036ADE5E
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
ArsR family transcriptional regulator
SCN18_30_10_14_R2_B_scaffold_1207_8
CN-SCN_Microbacterium_37x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(9059..9706)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SBZ9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD91726.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1207_9
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9883..10647)
DNA (765bp) protein (255aa)
membrane protein n=1 Tax=Burkholderia sp. JPY251 RepID=UPI000371897A
Membrane protein {ECO:0000313|EMBL:KFL50401.1}; TaxID=60550 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia pyrrocinia (Pseudomonas pyrrocinia).;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1207_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11231..12469)
DNA (1239bp) protein (413aa)
Cytochrome c oxidase, subunit I {ECO:0000313|EMBL:CBS86760.1}; EC=1.9.3.1 {ECO:0000313|EMBL:CBS86760.1};; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
cytochrome c oxidase subunit I (EC:1.9.3.1)
Cytochrome c oxidase, subunit I n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z740_AZOL4
SCN18_30_10_14_R2_B_scaffold_1207_11
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13272..14021
DNA (750bp) protein (250aa)
Cytochrome c class I n=1 Tax=Afipia sp. 1NLS2 RepID=D6V565_9BRAD
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:EFI53095.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
SCN18_30_10_14_R2_B_scaffold_1207_12
unknown

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14015..14167
DNA (153bp) protein (51aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1207_13
unknown

Not on your lists

14232..14576
DNA (345bp) protein (115aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1207_14
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14793..15185
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Acidiphilium sp. PM RepID=F7SAI8_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGO93808.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
SCN18_30_10_14_R2_B_scaffold_1207_15
unknown

Not on your lists

15229..15558
DNA (330bp) protein (110aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1207_16
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15630..17069
DNA (1440bp) protein (480aa)
Multicopper oxidase type 3 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V568_9BRAD
Multicopper oxidase type 3 {ECO:0000313|EMBL:EFI53098.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
multicopper oxidase
SCN18_30_10_14_R2_B_scaffold_1207_17
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17086..17781
DNA (696bp) protein (232aa)
UPI0003CE316C related cluster n=1 Tax=unknown RepID=UPI0003CE316C
cytochrome c oxidase Cu(A) center assembly protein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
SCN18_30_10_14_R2_B_scaffold_1207_18
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17795..18316
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CP74_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:EKU72686.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae ATCC 51230.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1207_19
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18335..18961
DNA (627bp) protein (209aa)
Thiol:disulfide interchange protein cycY n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F905_9RHIZ
cycY; cytochrome c-type biogenesis protein CycY (periplasmic thioredoxin)
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
SCN18_30_10_14_R2_B_scaffold_1207_20
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19313..19645
DNA (333bp) protein (111aa)
Putative thioredoxin, thioldisulfide interchange protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KQF5_RHISN
Redoxin {ECO:0000313|EMBL:ETR79358.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
thioredoxin-thioldisulfide interchange protein
SCN18_30_10_14_R2_B_scaffold_1207_21
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19642..20373
DNA (732bp) protein (244aa)
Cytochrome c biogenesis protein transmembrane region n=1 Tax=Oceanibaculum indicum P24 RepID=K2JRR1_9PROT
Cytochrome c biogenesis protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
SCN18_30_10_14_R2_B_scaffold_1207_22
unknown

Not on your lists

20373..20729
DNA (357bp) protein (119aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1207_23
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20976..21611
DNA (636bp) protein (212aa)
peroxidase (EC:1.11.1.7)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CLC4_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:EKU72683.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae ATCC 51230.;"
SCN18_30_10_14_R2_B_scaffold_1207_24
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21702..22142
DNA (441bp) protein (147aa)
Uncharacterized protein n=3 Tax=Acidiphilium RepID=A5FWT3_ACICJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGO95496.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
SCN18_30_10_14_R2_B_scaffold_1207_25
SCN_Rubrivivax_15x, SCN_Rubrivivax_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22303..23427
DNA (1125bp) protein (375aa)
Putative membrane protein n=1 Tax=Acidiphilium sp. PM RepID=F7SAJ2_9PROT
Putative membrane protein {ECO:0000313|EMBL:EGO93812.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
putative inner membrane protein
SCN18_30_10_14_R2_B_scaffold_1207_26
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23785..24669
DNA (885bp) protein (295aa)
Beta-lactamase domain protein n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZF60_METPB
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:ACB78307.1}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
SCN18_30_10_14_R2_B_scaffold_1207_27
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

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24931..25557
DNA (627bp) protein (209aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=mine drainage metagenome RepID=E6PXU8_9ZZZZ
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
SCN18_30_10_14_R2_B_scaffold_1207_28
alpha proteobacterium JLT2015, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25841..26164
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B34084
Uncharacterized protein {ECO:0000313|EMBL:EMD81768.1}; TaxID=1234595 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium JLT2015.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1207_29
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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26300..27271
DNA (972bp) protein (324aa)
Thioredoxin reductase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9WV56_9RHIZ
Thioredoxin reductase {ECO:0000313|EMBL:EIZ84308.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
pyridine nucleotide-disulfide oxidoreductase
SCN18_30_10_14_R2_B_scaffold_1207_30
SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, Plasmid-like

Not on your lists

27544..29238
DNA (1695bp) protein (565aa)
Transposase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98AK6_RHILO
transposase
Transposase {ECO:0000313|EMBL:BAB52411.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
Displaying items 1-30 of 46 in total

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