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SCN18_30_10_14_R2_B_scaffold_1543

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1543_1
unknown

Not on your lists

comp(2..139)
DNA (138bp) protein (46aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1543_2
SCNPILOT_CONT_750_P_Burkholderiales_64_62, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(227..1882)
DNA (1656bp) protein (552aa)
oxalyl-CoA decarboxylase (EC:4.1.1.8)
2-hydroxyacyl-CoA lyase 1 n=1 Tax=Crassostrea gigas RepID=K1RKU0_CRAGI
2-hydroxyacyl-CoA lyase 1 {ECO:0000313|EMBL:EKC42235.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
SCN18_30_10_14_R2_B_scaffold_1543_3
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2182..3411)
DNA (1230bp) protein (410aa)
formyl-CoA transferase (EC:2.8.3.16)
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI0003605031
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
SCN18_30_10_14_R2_B_scaffold_1543_4
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3494..4342
DNA (849bp) protein (283aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Uncharacterized protein {ECO:0000313|EMBL:ETX05023.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Enoyl-CoA hydratase/isomerase family protein id=4347746 bin=GWC2_Methylomirabilis_70_16 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
SCN18_30_10_14_R2_B_scaffold_1543_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4359..5615)
DNA (1257bp) protein (419aa)
putative acyl-CoA dehydrogenase (EC:1.3.99.-)
Putative acyl-CoA dehydrogenase n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5AQW2_9ACTN
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R2_B_scaffold_1543_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5630..6760)
DNA (1131bp) protein (377aa)
putative acyl-CoA dehydrogenase (EC:1.3.99.-)
Putative acyl-CoA dehydrogenase n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5A3M0_9ACTN
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ETR76201.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
SCN18_30_10_14_R2_B_scaffold_1543_7
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6787..7548)
DNA (762bp) protein (254aa)
fabG5; 3-oxoacyl-ACP reductase (EC:1.1.1.100)
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AAA536-G10 RepID=UPI00037BBF02
Short-chain dehydrogenase {ECO:0000313|EMBL:EYS91859.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-4.;"
SCN18_30_10_14_R2_B_scaffold_1543_8
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7631..8491
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003644CB3
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R2_B_scaffold_1543_9
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8494..9693
DNA (1200bp) protein (400aa)
acetyl-CoA C-acyltransferase (EC:2.3.1.16)
Acetyl-CoA C-acyltransferase n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GUW3_CUPNN
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KJK23459.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
SCN18_30_10_14_R2_B_scaffold_1543_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9666..10508)
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00035F4987
amidohydrolase 2
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R2_B_scaffold_1543_11
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10645..12513
DNA (1869bp) protein (623aa)
Predicted flavoprotein involved in K+ transport n=1 Tax=uncultured alpha proteobacterium HF0130_20P23 RepID=E0XTA4_9PROT
Predicted flavoprotein involved in K+ transport {ECO:0000313|EMBL:ADI17645.1}; TaxID=710809 species="Bacteria; Proteobacteria; Alphaproteobacteria; environmental samples.;" source="uncultured alpha proteobacterium HF0130_20P23.;"
monooxygenase
SCN18_30_10_14_R2_B_scaffold_1543_12
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12529..13722)
DNA (1194bp) protein (398aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GDW7_9BRAD
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ETW95364.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
L-carnitine dehydratase/bile acid-inducible protein F
SCN18_30_10_14_R2_B_scaffold_1543_13
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13802..15016
DNA (1215bp) protein (405aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T6G4_CAUSK
Uncharacterized protein {ECO:0000313|EMBL:ETX08781.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
iron-containing alcohol dehydrogenase
SCN18_30_10_14_R2_B_scaffold_1543_14
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15029..18526)
DNA (3498bp) protein (1166aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PML4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42831.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
carbamoyl-phosphate synthase L chain ATP-binding protein
SCN18_30_10_14_R2_B_scaffold_1543_15
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18616..18954
DNA (339bp) protein (113aa)
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FRR9_ISOV2
Lyase {ECO:0000313|EMBL:AHZ45679.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 15 items

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