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SCN18_30_10_14_R2_B_scaffold_3343

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_3343_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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184..1275
DNA (1092bp) protein (364aa)
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase id=2514102 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter capsulatus genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
Tax=GWF1_Rhodobacteraceae_65_7_curated
SCN18_30_10_14_R2_B_scaffold_3343_2
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1501..2622
DNA (1122bp) protein (374aa)
Membrane protein containing Glycosyl transferase, group 1 domain protein n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5R874_9PLAN
Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase {ECO:0000313|EMBL:GAK32436.1}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
glycosyl transferase, family 4, conserved region
SCN18_30_10_14_R2_B_scaffold_3343_3
unknown

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2619..3545
DNA (927bp) protein (309aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_3343_4
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3739..4356
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000368DBB9
Marine sediment metagenome DNA, contig: S01H1_L01374 {ECO:0000313|EMBL:GAF79082.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
MarR family transcriptional regulator domain-containing protein
SCN18_30_10_14_R2_B_scaffold_3343_5
SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, Alphaproteobacteria, Proteobacteria, Bacteria

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4529..5458
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Vibrio genomosp. F6 RepID=UPI00031D2DB3
Uncharacterized protein {ECO:0000313|EMBL:KGM35859.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
lipopolysaccharide biosynthesis protein
SCN18_30_10_14_R2_B_scaffold_3343_6
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5585..6697
DNA (1113bp) protein (371aa)
Putative nucleotide sugar transaminase protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z6Z6_9GAMM
DegT/DnrJ/EryC1/StrS family aminotransferase protein
Tax=CG_Hydro_01
SCN18_30_10_14_R2_B_scaffold_3343_7
SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220, SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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6741..7439
DNA (699bp) protein (233aa)
hypothetical protein id=12493914 bin=THIO_HI species=Rhizobium leguminosarum genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=CG_Hydro_01
SCN18_30_10_14_R2_B_scaffold_3343_8
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7444..8406
DNA (963bp) protein (321aa)
Putative uncharacterized protein n=1 Tax=Pectobacterium carotovorum subsp. carotovorum (strain PC1) RepID=C6DKZ6_PECCP
hypothetical protein
Tax=BJP_IG2158_Methylococcales_50_91
SCN18_30_10_14_R2_B_scaffold_3343_9
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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8406..9374
DNA (969bp) protein (323aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO32349.1}; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
hypothetical protein id=12496423 bin=THIO_MID species=Rhizobium leguminosarum genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_3343_10
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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9371..9832
DNA (462bp) protein (154aa)
Mycothiol acetyltransferase {ECO:0000313|EMBL:GAO32350.1}; EC=2.3.1.189 {ECO:0000313|EMBL:GAO32350.1};; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI0003728CCB
putative acetyltransferase
SCN18_30_10_14_R2_B_scaffold_3343_11
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9786..10580
DNA (795bp) protein (265aa)
Methyltransferase family protein n=1 Tax=Rheinheimera sp. A13L RepID=F7NUN7_9GAMM
type 12 methyltransferase
Tax=CG_Hydro_01
SCN18_30_10_14_R2_B_scaffold_3343_12
Acinetobacter sp. NIPH 809_SCNpilot_P_inoc_Acinetobacter_41_9_partial, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10585..11298
DNA (714bp) protein (238aa)
Membrane protein involved in the export of O-antigen and teichoic acid n=1 Tax=Leptothrix ochracea L12 RepID=I4Z518_9BURK
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:KHD08485.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
O-antigen transporter-like protein
Displaying 12 items

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