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SCN18_26_2_15_R2_B_scaffold_1075

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R2_B_scaffold_1075_1
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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3..647
DNA (645bp) protein (215aa)
(2Fe-2S)-binding domain protein n=3 Tax=Acidiphilium RepID=A5FUM2_ACICJ
Aldehyde dehydrogenase small subunit {ECO:0000313|EMBL:GAN76857.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
2Fe-2S iron-sulfur cluster binding domain-containing protein
SCN18_26_2_15_R2_B_scaffold_1075_2
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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679..3060
DNA (2382bp) protein (794aa)
carbon-monoxide dehydrogenase n=1 Tax=Elioraea tepidiphila RepID=UPI00037109C6
Carbon monoxide dehydrogenase/molybdopterin binding aldehyde oxidase {ECO:0000313|EMBL:GAN76856.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase
SCN18_26_2_15_R2_B_scaffold_1075_3
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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3148..3942
DNA (795bp) protein (265aa)
coxM; carbon monoxide dehydrogenase medium subunit (EC:1.2.99.2)
Carbon-monoxide dehydrogenase (Acceptor) n=3 Tax=Acidiphilium RepID=A5FUM4_ACICJ
Carbon monoxide dehydrogenase {ECO:0000313|EMBL:GAN76855.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCN18_26_2_15_R2_B_scaffold_1075_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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4521..5384
DNA (864bp) protein (288aa)
Putative uncharacterized protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13FG8_BURXL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE37171.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
SCN18_26_2_15_R2_B_scaffold_1075_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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5460..7037
DNA (1578bp) protein (526aa)
Tat pathway signal sequence domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A5Y7_9PROT
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EHL97340.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
Putative extracellular solute-binding protein
SCN18_26_2_15_R2_B_scaffold_1075_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7164..8429
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002EF0941
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:BAF86818.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCN18_26_2_15_R2_B_scaffold_1075_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8430..8849)
DNA (420bp) protein (140aa)
Ppox class probable f420-dependent enzyme, family n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L381_THERP
ppox class F420-dependent protein
Ppox class probable f420-dependent enzyme, family {ECO:0000313|EMBL:ACM07115.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
SCN18_26_2_15_R2_B_scaffold_1075_8
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8843..10033)
DNA (1191bp) protein (397aa)
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase (EC:3.5.1.4)
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase {ECO:0000313|EMBL:AIQ88199.1}; EC=3.5.1.4 {ECO:0000313|EMBL:AIQ88199.1};; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium oryzae CBMB20.;"
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TLH4_9PROT
SCN18_26_2_15_R2_B_scaffold_1075_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10210..11166
DNA (957bp) protein (319aa)
NHL repeat protein n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IRR8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGJ69175.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
NHL repeat family protein
SCN18_26_2_15_R2_B_scaffold_1075_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11313..11516)
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Burkholderia kururiensis RepID=UPI000349DDB4
chaB; Cation transport regulator ChaB
Cation transport regulator ChaB {ECO:0000313|EMBL:CCB64604.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_1075_11
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11554..12666)
DNA (1113bp) protein (371aa)
Beta-lactamase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A5Y6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:ETR76432.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
penicillin-binding protein, beta-lactamase class C
SCN18_26_2_15_R2_B_scaffold_1075_12
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12802..13260
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium MOLA814 RepID=V4XZV2_9PROT
Phosphoserine aminotransferase {ECO:0000313|EMBL:GAN77007.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCN18_26_2_15_R2_B_scaffold_1075_13
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13264..14163
DNA (900bp) protein (300aa)
3-hydroxyisobutyrate dehydrogenase {ECO:0000256|RuleBase:RU910714}; Short=HIBADH {ECO:0000256|RuleBase:RU910714};; EC=1.1.1.31 {ECO:0000256|RuleBase:RU910714};; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Azospirillum amazonense Y2 RepID=G1XXI8_9PROT
3-hydroxyisobutyrate dehydrogenase
SCN18_26_2_15_R2_B_scaffold_1075_14
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14185..15330)
DNA (1146bp) protein (382aa)
C4-dicarboxylate transporter/malic acid transport family protein n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7Q3J6_METSZ
C4-dicarboxylate transporter/malic acid transport family protein
C4-dicarboxylate transporter/malic acid transport family protein {ECO:0000313|EMBL:CCJ05889.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
SCN18_26_2_15_R2_B_scaffold_1075_15
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15457..16368
DNA (912bp) protein (304aa)
Transcriptional regulator, LysR family n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IIC5_BEII9
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACB96079.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCN18_26_2_15_R2_B_scaffold_1075_16
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16405..18126
DNA (1722bp) protein (574aa)
Acetyl-CoA synthetase n=1 Tax=Azoarcus sp. KH32C RepID=H0PXJ6_9RHOO
Fatty-acid--CoA ligase/acetyl-coenzyme A synthetase {ECO:0000313|EMBL:GAN78300.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
acsB; acetyl-CoA synthetase
SCN18_26_2_15_R2_B_scaffold_1075_17
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18287..19195
DNA (909bp) protein (303aa)
Putative ABC transporter permease protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T1R0_9BRAD
Putative ABC transporter permease protein {ECO:0000313|EMBL:CCE00387.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
ABC transporter permease
SCN18_26_2_15_R2_B_scaffold_1075_18
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19192..20052
DNA (861bp) protein (287aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CU88_VARPS
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACS20301.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCN18_26_2_15_R2_B_scaffold_1075_19
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20090..21478
DNA (1389bp) protein (463aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI000363C6B4
Extracellular solute-binding protein {ECO:0000313|EMBL:CBN54484.1}; TaxID=272129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillatoria] sp. PCC 6506.;"
putative transporter
SCN18_26_2_15_R2_B_scaffold_1075_20
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21551..22408
DNA (858bp) protein (286aa)
Amino acid ABC transporter permease protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G9V0_9BRAD
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:KJC59030.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
amino acid ABC transporter permease
SCN18_26_2_15_R2_B_scaffold_1075_21
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22434..23393
DNA (960bp) protein (320aa)
branched-chain amino acid ABC transporter permease n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037C7F1B
inner-membrane translocator
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:KJC52540.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
SCN18_26_2_15_R2_B_scaffold_1075_22
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23383..24114
DNA (732bp) protein (244aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YP90_9BRAD
ABC transporter {ECO:0000313|EMBL:KJC59029.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
ABC transporter ATP-binding protein
Displaying 22 items

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