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SCN18_26_2_15_R2_B_scaffold_2

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Displaying items 1-30 of 882 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R2_B_scaffold_2_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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426..1682
DNA (1257bp) protein (419aa)
Putative iron-regulated protein n=1 Tax=Rhizobium sp. CF142 RepID=J2LC18_9RHIZ
Putative iron-regulated protein {ECO:0000313|EMBL:EJJ31037.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
peptidase
SCN18_26_2_15_R2_B_scaffold_2_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1772..3283
DNA (1512bp) protein (504aa)
Possible thiol oxidoreductase n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YKF5_MOBAS
Uncharacterized protein {ECO:0000313|EMBL:KFC62559.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
thiol oxidoreductase
SCN18_26_2_15_R2_B_scaffold_2_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3283..4356
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036AD657
Peptidase M75, Imelysin {ECO:0000313|EMBL:KFC62560.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
putative periplasmic lipoprotein
SCN18_26_2_15_R2_B_scaffold_2_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4358..5449
DNA (1092bp) protein (364aa)
UPI0003CE162B related cluster n=1 Tax=unknown RepID=UPI0003CE162B
Uncharacterized protein {ECO:0000313|EMBL:KKB84265.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
hypothetical protein
SCN18_26_2_15_R2_B_scaffold_2_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5459..6469)
DNA (1011bp) protein (337aa)
alanine racemase (EC:5.1.1.1)
Alanine racemase n=2 Tax=Sinorhizobium medicae RepID=A6UG45_SINMW
Transcriptional regulator {ECO:0000313|EMBL:KKB10901.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
SCN18_26_2_15_R2_B_scaffold_2_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6920..8182
DNA (1263bp) protein (421aa)
ABC transporter substrate-binding protein n=1 Tax=Kaistia granuli RepID=UPI00037620C3
Maltose/maltodextrin ABC transporter, substrate bi nding periplasmic protein MalE {ECO:0000313|EMBL:CDP51110.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
ABC transporter substrate-binding protein
SCN18_26_2_15_R2_B_scaffold_2_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8260..9240
DNA (981bp) protein (327aa)
Permease component of ABC-type sugar transporter n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HK56_9RHIZ
Maltose/maltodextrin ABC transporter, permease pro tein MalF {ECO:0000313|EMBL:CDP51109.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
thuF; sn-glycerol-3-phosphate transport system permease protein ugpA
SCN18_26_2_15_R2_B_scaffold_2_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9237..10106
DNA (870bp) protein (290aa)
sugar ABC transporter permease n=1 Tax=Kaistia granuli RepID=UPI00036D8838
Sugar ABC transporter permease {ECO:0000313|EMBL:KFL27002.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
thuG; trehalose/maltose ABC transporter, permease protein
SCN18_26_2_15_R2_B_scaffold_2_9
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10112..11122
DNA (1011bp) protein (337aa)
histidinol-phosphatase n=1 Tax=Sinorhizobium medicae RepID=UPI000367C9B5
Glycerol-3-phosphate ABC transporter ATPase {ECO:0000313|EMBL:KFL27001.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
ABC transporter-like protein
SCN18_26_2_15_R2_B_scaffold_2_10
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11256..12065
DNA (810bp) protein (270aa)
Trehalose utilization protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HKI2_9RHIZ
PalA {ECO:0000313|EMBL:KKB07290.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
SCN18_26_2_15_R2_B_scaffold_2_11
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12087..13133
DNA (1047bp) protein (349aa)
Oxidoreductase {ECO:0000313|EMBL:CDP50313.1}; EC=1.1.1.- {ECO:0000313|EMBL:CDP50313.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Myo-inositol 2-dehydrogenase protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UBB6_9RHIZ
thuB; putative trehalose oxidoreductase
SCN18_26_2_15_R2_B_scaffold_2_12
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13188..13439
DNA (252bp) protein (84aa)
membrane protein n=1 Tax=Kaistia granuli RepID=UPI00037D2DB0
Membrane protein {ECO:0000313|EMBL:KKB80222.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
transglycosylase-associated protein
SCN18_26_2_15_R2_B_scaffold_2_13
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13506..14144
DNA (639bp) protein (213aa)
Methyltransferase domain n=1 Tax=uncultured organism RepID=T1W7C1_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CDP50297.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
type 11 methyltransferase
SCN18_26_2_15_R2_B_scaffold_2_14
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14228..14875
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI000381D754
Uncharacterized protein {ECO:0000313|EMBL:KKB85340.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
hypothetical protein
SCN18_26_2_15_R2_B_scaffold_2_15
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14990..16198
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E628C4
Thiosulfate reductase cytochrome B subunit (Membra ne anchoring protein) {ECO:0000313|EMBL:CDP50308.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
thiosulfate reductase cytochrome B subunit
SCN18_26_2_15_R2_B_scaffold_2_16
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16200..16991
DNA (792bp) protein (264aa)
Molybdopterin oxidoreductase n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7F0J9_9RHIZ
Molybdopterin oxidoreductase {ECO:0000313|EMBL:KFL26832.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
sulfite oxidase and related enzymes
SCN18_26_2_15_R2_B_scaffold_2_17
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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17147..17593
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7F048_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EEX15620.1}; TaxID=501479 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreicella sp. SE45.;"
hypothetical protein
SCN18_26_2_15_R2_B_scaffold_2_18
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17684..17923
DNA (240bp) protein (80aa)
SCN18_26_2_15_R2_B_scaffold_2_19
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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18004..18123
DNA (120bp) protein (40aa)
SCN18_26_2_15_R2_B_scaffold_2_20
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18213..19556)
DNA (1344bp) protein (448aa)
SCN18_26_2_15_R2_B_scaffold_2_21
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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19645..19920
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DMQ8_9GAMM
hypothetical protein
Tax=RBG_16_Acidobacteria_64_8_curated
SCN18_26_2_15_R2_B_scaffold_2_22
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(19917..21410)
DNA (1494bp) protein (498aa)
AMP-forming acyl-CoA synthetase n=1 Tax=Moorea producens 3L RepID=F4XZK8_9CYAN
AMP-forming acyl-CoA synthetase {ECO:0000313|EMBL:EGJ30013.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
AMP-dependent synthetase/ligase
SCN18_26_2_15_R2_B_scaffold_2_23
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(21526..22089)
DNA (564bp) protein (188aa)
Riboflavin biosynthesis protein RibD n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FEM6_STIAD
Riboflavin biosynthesis protein RibD
Riboflavin biosynthesis protein RibD {ECO:0000313|EMBL:ADO75182.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
SCN18_26_2_15_R2_B_scaffold_2_24
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(22097..22720)
DNA (624bp) protein (208aa)
cytidine deaminase n=1 Tax=Ochrobactrum anthropi RepID=UPI00028A2DB8
Cytidine deaminase {ECO:0000313|EMBL:KKB80215.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
zinc-binding CMP/dCMP deaminase
SCN18_26_2_15_R2_B_scaffold_2_25
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22720..23484)
DNA (765bp) protein (255aa)
UPI0003CEE816 related cluster n=1 Tax=unknown RepID=UPI0003CEE816
Lipoprotein-related protein {ECO:0000313|EMBL:CDP50302.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
SCN18_26_2_15_R2_B_scaffold_2_26
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23549..24040)
DNA (492bp) protein (164aa)
Ureidoglycolate lyase {ECO:0000256|HAMAP-Rule:MF_00616, ECO:0000256|SAAS:SAAS00181913}; EC=4.3.2.3 {ECO:0000256|HAMAP-Rule:MF_00616, ECO:0000256|SAAS:SAAS00181913};; Ureidoglycolatase {ECO:0000256|HAMAP-Rule:MF_00616}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
ureidoglycolate hydrolase (EC:3.5.3.19)
Ureidoglycolate lyase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=ALLA_MESSB
SCN18_26_2_15_R2_B_scaffold_2_27
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24052..24873)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI00035CB3F3
Uncharacterized protein {ECO:0000313|EMBL:KKB80213.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
allantoin catabolism protein
SCN18_26_2_15_R2_B_scaffold_2_28
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25044..25229
DNA (186bp) protein (62aa)
SCN18_26_2_15_R2_B_scaffold_2_29
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25247..25942)
DNA (696bp) protein (232aa)
Glutathione S-transferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REQ6_PELHB
glutathione S-transferase
Glutathione S-transferase {ECO:0000313|EMBL:AEQ50910.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCN18_26_2_15_R2_B_scaffold_2_30
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25970..27391)
DNA (1422bp) protein (474aa)
Chitooligosaccharide deacetylase, putative uricase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6T4_PELHB
Polysaccharide deacetylase {ECO:0000313|EMBL:KFL32023.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
chitooligosaccharide deacetylase uricase
Displaying items 1-30 of 882 in total

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