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SCN18_25_8_15_R2_B_scaffold_180

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Displaying items 1-30 of 171 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_180_1
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

193..447
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RTD5_LEAB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ15949.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
SCN18_25_8_15_R2_B_scaffold_180_2
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

440..889
DNA (450bp) protein (150aa)
Response regulator receiver protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RTD4_LEAB4
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ADQ15948.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
SCN18_25_8_15_R2_B_scaffold_180_3
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1198..2004)
DNA (807bp) protein (269aa)
PRTRC system ThiF family protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FS05_9SPHI
PRTRC system ThiF family protein {ECO:0000313|EMBL:EEI94370.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
uba/thif-type nad/fad binding protein
SCN18_25_8_15_R2_B_scaffold_180_4
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2004..2714)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2T8H9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJL74402.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
PRTRC system protein B
SCN18_25_8_15_R2_B_scaffold_180_5
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2726..3880)
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00036D7625
Uncharacterized protein {ECO:0000313|EMBL:KGO08732.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_180_6
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3900..4118)
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RTC9_LEAB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ15943.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
SCN18_25_8_15_R2_B_scaffold_180_7
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4151..4675)
DNA (525bp) protein (175aa)
PRTRC system protein E n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FS09_9SPHI
Prtrc system protein e {ECO:0000313|EMBL:KFF17250.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
prtrc system protein e
SCN18_25_8_15_R2_B_scaffold_180_8
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4672..4887)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. F52 RepID=J0S1U9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EEI94375.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_180_9
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4901..5560)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Capnocytophaga sp. oral taxon 336 str. F0502 RepID=S3C022_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EPD99657.1}; TaxID=1203603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp. oral taxon 336 str. F0502.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_180_10
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5593..5787)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FS11_9SPHI
DNA-binding protein {ECO:0000313|EMBL:KGO11294.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_180_11
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5791..5964)
DNA (174bp) protein (58aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000381E5FC
Uncharacterized protein {ECO:0000313|EMBL:CDT25476.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
SCN18_25_8_15_R2_B_scaffold_180_12
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6017..7090)
DNA (1074bp) protein (358aa)
Phage/plasmid-related protein TIGR03299 n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FS12_9SPHI
Phage/plasmid-related protein TIGR03299 {ECO:0000313|EMBL:EEI94377.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
phage/plasmid-related protein tigr03299
SCN18_25_8_15_R2_B_scaffold_180_13
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7134..7514)
DNA (381bp) protein (127aa)
single-stranded DNA-binding protein n=1 Tax=Empedobacter brevis RepID=UPI0003805F5A
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
single-stranded DNA-binding protein
SCN18_25_8_15_R2_B_scaffold_180_14
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8138..9610
DNA (1473bp) protein (491aa)
Resolvase domain n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C9P1_SPHS2
resolvase
Resolvase {ECO:0000313|EMBL:AIM38421.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
SCN18_25_8_15_R2_B_scaffold_180_15
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9834..10247
DNA (414bp) protein (138aa)
Resolvase, N-terminal domain protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WEQ4_FUSMR
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EEO36360.1}; TaxID=469616 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium mortiferum ATCC 9817.;"
SCN18_25_8_15_R2_B_scaffold_180_16
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10258..11820
DNA (1563bp) protein (521aa)
Site-specific recombinase, DNA invertase Pin n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G1E8_ECHVK
site-specific recombinase, DNA invertase Pin
Site-specific recombinase, DNA invertase Pin {ECO:0000313|EMBL:AGA79372.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
SCN18_25_8_15_R2_B_scaffold_180_trna_4
unknown

Not on your lists

comp(11774..11847)
DNA (74bp)
transferRNA Pro
SCN18_25_8_15_R2_B_scaffold_180_trna_3
unknown

Not on your lists

comp(12265..12338)
DNA (74bp)
transferRNA Pro
SCN18_25_8_15_R2_B_scaffold_180_17
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12593..13345
DNA (753bp) protein (251aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO43223.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
SCN18_25_8_15_R2_B_scaffold_180_18
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13577..15703)
DNA (2127bp) protein (709aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TM08_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98768.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_25_8_15_R2_B_scaffold_180_19
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15889..16068
DNA (180bp) protein (60aa)
SCN18_25_8_15_R2_B_scaffold_180_20
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16075..17706)
DNA (1632bp) protein (544aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
PAS domain S-box protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FVC1_9SPHI
PAS sensor protein
SCN18_25_8_15_R2_B_scaffold_180_21
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17782..19509)
DNA (1728bp) protein (576aa)
Uncharacterized protein {ECO:0000313|EMBL:KFF11017.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
Periplasmic protease id=2576877 bin=GWF2_Bacteroidetes_40_14 species=Joostella marina genus=Joostella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_180_22
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19716..20852)
DNA (1137bp) protein (379aa)
Anti-FecI sigma factor, FecR n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PCU0_CHIPD
anti-FecI sigma factor FecR
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ACU61439.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCN18_25_8_15_R2_B_scaffold_180_23
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20892..21401)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI000376CD63
ECF subfamily RNA polymerase sigma-24 subunit
Uncharacterized protein {ECO:0000313|EMBL:ETZ21847.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
SCN18_25_8_15_R2_B_scaffold_180_24
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21638..25003
DNA (3366bp) protein (1122aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Tannerella sp. 6_1_58FAA_CT1 RepID=G9S477_9PORP
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EHL85102.1}; TaxID=665949 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. 6_1_58FAA_CT1.;"
TonB-dependent receptor plug
SCN18_25_8_15_R2_B_scaffold_180_25
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25080..26657
DNA (1578bp) protein (526aa)
Putative uncharacterized protein n=1 Tax=Tannerella sp. 6_1_58FAA_CT1 RepID=G9S476_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EHL85101.1}; TaxID=665949 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. 6_1_58FAA_CT1.;"
RagB/SusD domain-containing protein
SCN18_25_8_15_R2_B_scaffold_180_26
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26669..27616
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Coprobacter fastidiosus NSB1 RepID=U5CGB2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:ERM88011.1}; TaxID=1349822 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter fastidiosus NSB1.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_180_27
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27623..29044
DNA (1422bp) protein (474aa)
Putative uncharacterized protein n=1 Tax=Tannerella sp. 6_1_58FAA_CT1 RepID=G9S473_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EHL85098.1}; TaxID=665949 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. 6_1_58FAA_CT1.;"
sialate O-acetylesterase
SCN18_25_8_15_R2_B_scaffold_180_28
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29034..31064
DNA (2031bp) protein (677aa)
Chondroitin AC lyase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XV46_PEDHD
chondroitin AC lyase
Chondroitin AC lyase {ECO:0000313|EMBL:ACU06054.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
Displaying items 1-30 of 171 in total

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