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SCN18_25_8_15_R2_B_scaffold_1812

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1812_1
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3..323
DNA (321bp) protein (107aa)
Conjugative transposon protein TraA n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FW47_9FLAO
Conjugative transposon protein TraA {ECO:0000313|EMBL:EIA07276.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
conjugal transfer protein TraA
SCN18_25_8_15_R2_B_scaffold_1812_2
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

336..740
DNA (405bp) protein (135aa)
Uncharacterized protein n=2 Tax=Bacteroidetes RepID=C2G235_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EFK33908.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
conjugal transfer protein TraB
SCN18_25_8_15_R2_B_scaffold_1812_3
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

754..1044
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Myroides odoratimimus CCUG 12901 RepID=H1GZC9_9FLAO
TraB protein
TraB protein {ECO:0000313|EMBL:BAP31934.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
SCN18_25_8_15_R2_B_scaffold_1812_4
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1056..1328
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C5V1_SPHS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ80116.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCN18_25_8_15_R2_B_scaffold_1812_5
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1225..1428)
DNA (204bp) protein (68aa)
SCN18_25_8_15_R2_B_scaffold_1812_6
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1548..2069
DNA (522bp) protein (174aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K5ZIB7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCY50993.1}; TaxID=1262737 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:189.;"
MT-A70 family protein
SCN18_25_8_15_R2_B_scaffold_1812_7
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2076..2708
DNA (633bp) protein (211aa)
Putative uncharacterized protein n=1 Tax=Myroides odoratimimus CCUG 12901 RepID=H1GZD0_9FLAO
Conjugal transfer protein TraD {ECO:0000313|EMBL:KEQ31105.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1812_8
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2783..4687
DNA (1905bp) protein (635aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G237_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIM38393.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
SCN18_25_8_15_R2_B_scaffold_1812_9
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4965..5441
DNA (477bp) protein (159aa)
Uncharacterized protein {ECO:0000313|EMBL:AKH95182.1}; TaxID=1352940 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica FMS-007.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1812_10
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5669..5974
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S7H3_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY52233.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCN18_25_8_15_R2_B_scaffold_1812_11
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5986..6318
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C5U6_SPHS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ80111.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCN18_25_8_15_R2_B_scaffold_1812_12
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6315..7682
DNA (1368bp) protein (456aa)
TraG family conjugation system ATPase n=1 Tax=Myroides odoratimimus CCUG 12901 RepID=H1GZD9_9FLAO
Conjugation system ATPase, TraG family {ECO:0000313|EMBL:CDT28820.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
TraG family conjugation system ATPase
SCN18_25_8_15_R2_B_scaffold_1812_13
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7736..8872
DNA (1137bp) protein (379aa)
TraG family conjugation system ATPase n=1 Tax=Myroides odoratimimus CCUG 12901 RepID=H1GZD9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:GAE65870.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
type IV secretory pathway VirB4 components-like protein
SCN18_25_8_15_R2_B_scaffold_1812_14
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8895..9110
DNA (216bp) protein (72aa)
SCN18_25_8_15_R2_B_scaffold_1812_15
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9168..9800
DNA (633bp) protein (211aa)
Conjugate transposon protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0NPT7_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY52236.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCN18_25_8_15_R2_B_scaffold_1812_16
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9804..10799
DNA (996bp) protein (332aa)
TraJ family protein conjugative transposon n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S7H7_PEDSD
hypothetical protein
TraJ family protein conjugative transposon {ECO:0000313|EMBL:ADY52237.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCN18_25_8_15_R2_B_scaffold_1812_17
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10816..11439
DNA (624bp) protein (208aa)
Conjugal transfer protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MK32_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:CDT29825.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1812_18
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11450..11875
DNA (426bp) protein (142aa)
Putative uncharacterized protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RTE4_LEAB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ15958.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
SCN18_25_8_15_R2_B_scaffold_1812_19
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11896..12180
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C5U0_SPHS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ80105.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCN18_25_8_15_R2_B_scaffold_1812_20
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12170..13507
DNA (1338bp) protein (446aa)
Conjugative transposon TraM protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C5T9_SPHS2
conjugative transposon TraM protein
Conjugative transposon TraM protein {ECO:0000313|EMBL:ADZ80104.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCN18_25_8_15_R2_B_scaffold_1812_21
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13536..14438
DNA (903bp) protein (301aa)
Conjugate transposon protein TraN n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S7I2_PEDSD
Conjugate transposon protein TraN {ECO:0000313|EMBL:CDT29785.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
conjugate transposon protein TraN
SCN18_25_8_15_R2_B_scaffold_1812_22
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14456..15013
DNA (558bp) protein (186aa)
Putative uncharacterized protein n=1 Tax=Myroides odoratimimus CCUG 12901 RepID=H1GZE6_9FLAO
Conjugative transposon protein TraO
Conjugative transposon protein TraO {ECO:0000313|EMBL:ADZ80102.1}; Flags: Precursor;; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCN18_25_8_15_R2_B_scaffold_1812_23
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15026..15460
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C5T6_SPHS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ80101.1}; Flags: Precursor;; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCN18_25_8_15_R2_B_scaffold_1812_24
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15658..15936
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C5T5_SPHS2
Uncharacterized protein {ECO:0000313|EMBL:CDT29754.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1812_25
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15979..16713
DNA (735bp) protein (245aa)
Helix-turn-helix, AraC domain n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RQI1_LEAB4
AraC family transcriptional regulator {ECO:0000313|EMBL:KEQ30205.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
helix-turN-helix, arac domain
SCN18_25_8_15_R2_B_scaffold_1812_26
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16779..17321
DNA (543bp) protein (181aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FNM4_FLAJ1
Uncharacterized protein {ECO:0000313|EMBL:KEQ30206.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
deaminase-reductase domain-containing protein
SCN18_25_8_15_R2_B_scaffold_1812_27
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17591..17659
DNA (69bp) protein (23aa)
Displaying 27 items

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