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SCN18_25_8_15_R2_B_scaffold_3214

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_3214_1
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..801)
DNA (801bp) protein (267aa)
Putative Pilus assembly protein cpaC n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFS3_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB76780.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
putative Pilus assembly protein cpaC
SCN18_25_8_15_R2_B_scaffold_3214_2
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(815..1741)
DNA (927bp) protein (309aa)
Flp pilus assembly protein RcpC/CpaB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFS2_PELHB
Flp pilus assembly protein RcpC/CpaB {ECO:0000313|EMBL:KFC61313.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
Flp pilus assembly protein RcpC/CpaB
SCN18_25_8_15_R2_B_scaffold_3214_3
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1943..2443)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D693BE
Uncharacterized protein {ECO:0000313|EMBL:KKB76716.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
peptidase A24A, prepilin type IV
SCN18_25_8_15_R2_B_scaffold_3214_4
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2452..2649)
DNA (198bp) protein (66aa)
Flp/Fap pilin component n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7Z2Y7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL26161.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3214_5
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2768..2947)
DNA (180bp) protein (60aa)
PilA2 pilus assembly protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J2R3_POLGS
Uncharacterized protein {ECO:0000313|EMBL:KKB76718.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
pilA2; PilA2 pilus assembly protein
SCN18_25_8_15_R2_B_scaffold_3214_6
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3290..3733
DNA (444bp) protein (148aa)
Secretin RcpA/CpaC-like protein, associated with Flp pilus assembly n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFR8_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL31001.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
secretin RcpA/CpaC-like protein, associated with Flp pilus assembly
SCN18_25_8_15_R2_B_scaffold_3214_7
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3865..4392
DNA (528bp) protein (176aa)
TadZ/CpaE, associated with Flp pilus assembly-like protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFR7_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL31002.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
TadZ/CpaE, associated with Flp pilus assembly-like protein
SCN18_25_8_15_R2_B_scaffold_3214_8
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4392..4970
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6UCB2_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KFL31003.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3214_9
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5062..5682
DNA (621bp) protein (207aa)
Haloacid dehalogenase-like hydrolase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFR5_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL31004.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
haloacid dehalogenase
SCN18_25_8_15_R2_B_scaffold_3214_10
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5723..6118)
DNA (396bp) protein (132aa)
Lactoylglutathione lyase n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1XDW6_9RHIZ
Lactoylglutathione lyase {ECO:0000313|EMBL:KFL31006.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCN18_25_8_15_R2_B_scaffold_3214_11
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6208..6849)
DNA (642bp) protein (214aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Uracil phosphoribosyltransferase n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YHN2_MOBAS
upp; hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3214_12
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6927..8144)
DNA (1218bp) protein (406aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Phosphopentomutase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFR3_PELHB
phosphopentomutase
SCN18_25_8_15_R2_B_scaffold_3214_13
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8149..9471)
DNA (1323bp) protein (441aa)
Thymidine phosphorylase {ECO:0000256|SAAS:SAAS00031984}; EC=2.4.2.4 {ECO:0000256|SAAS:SAAS00031985};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Thymidine phosphorylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFR2_PELHB
thymidine phosphorylase
SCN18_25_8_15_R2_B_scaffold_3214_14
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9629..9718)
DNA (90bp) protein (30aa)
Aldehyde dehydrogenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFR0_PELHB
Aldehyde dehydrogenase {ECO:0000313|EMBL:KFL31010.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
aldehyde dehydrogenase
Displaying 14 items

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