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SCN18_25_8_15_R2_B_scaffold_3272

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_3272_1
unknown

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comp(1..135)
DNA (135bp) protein (45aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_3272_2
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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193..1362
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI0003801D91
Uncharacterized protein {ECO:0000313|EMBL:KFL30348.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3272_3
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1359..2183
DNA (825bp) protein (275aa)
Sugar phosphate isomerase/epimerase n=1 Tax=Rhizobium sp. CF142 RepID=J2L5J4_9RHIZ
Endonuclease {ECO:0000313|EMBL:KFL30347.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3272_4
SCN_Thiobacillus_53x, SCN_Thiobacillus_53x, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2243..2881
DNA (639bp) protein (213aa)
Glutathione S-transferase {ECO:0000313|EMBL:CDP52372.1}; EC=2.5.1.18 {ECO:0000313|EMBL:CDP52372.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Glutathione S-transferase domain-containing protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BZ23_9RHIZ
glutathione S-transferase domain-containing protein
SCN18_25_8_15_R2_B_scaffold_3272_5
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2956..3336)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REE0_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL30346.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3272_6
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3574..4767)
DNA (1194bp) protein (398aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA33_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL30345.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
23S rRNA (uracil-5-) -methyltransferase RumA
SCN18_25_8_15_R2_B_scaffold_3272_7
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4850..5848)
DNA (999bp) protein (333aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R992_PELHB
3-beta hydroxysteroid dehydrogenase {ECO:0000313|EMBL:KFL30344.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
NAD-dependent epimerase/dehydratase
SCN18_25_8_15_R2_B_scaffold_3272_8
unknown

Not on your lists

comp(5948..6334)
DNA (387bp) protein (129aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_3272_trna_1
unknown

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6412..6493
DNA (82bp)
transferRNA Leu
SCN18_25_8_15_R2_B_scaffold_3272_9
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6594..8186
DNA (1593bp) protein (531aa)
Putative recombinase protein, phage integrase family n=1 Tax=Rhizobium etli (strain CFN 42 / ATCC 51251) RepID=Q2KDM1_RHIEC
phage integrase family recombinase
Putative recombinase protein, phage integrase family {ECO:0000313|EMBL:ABC89065.1}; TaxID=347834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CFN 42 / ATCC 51251).;"
SCN18_25_8_15_R2_B_scaffold_3272_10
Paracoccus sp. 361_CN-SCN_Paracoccus_21x, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8597..9103
DNA (507bp) protein (169aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=638300 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobacterium.;" source="Cardiobacterium hominis ATCC 15826.;"
Ribonuclease H n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8ND69_9GAMM
rnhA; ribonuclease H
SCN18_25_8_15_R2_B_scaffold_3272_11
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9103..9540
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IPD9_METNO
Uncharacterized protein {ECO:0000313|EMBL:KKC34845.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
hypothetical protein
Displaying 12 items

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