ggKbase home page

SCN18_25_8_15_R2_B_scaffold_3951

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_3951_1
unknown

Not on your lists

comp(1..147)
DNA (147bp) protein (49aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_3951_2
scnpilot_dereplicated_Phage_unknown_6, scnpilot_dereplicated_Phage_unknown_6, scnpilot_dereplicated_Phage_unknown_6, scnpilot_dereplicated_Phage_unknown_6, scnpilot_dereplicated_Phage_unknown_6, Phage

Not on your lists

comp(119..2038)
DNA (1920bp) protein (640aa)
Uncharacterized protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HVV3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL32805.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3951_3
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2038..2298)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00036DE6DC
Uncharacterized protein {ECO:0000313|EMBL:KFL32806.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3951_4
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2447..3466
DNA (1020bp) protein (340aa)
NAD-dependent epimerase/dehydratase (EC:5.1.3.12)
UPI0003CE8AE1 related cluster n=1 Tax=unknown RepID=UPI0003CE8AE1
UDP-glucuronate 5-epimerase {ECO:0000313|EMBL:KFL32807.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCN18_25_8_15_R2_B_scaffold_3951_5
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3463..5175)
DNA (1713bp) protein (571aa)
Uncharacterized protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HEP3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB75926.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
capsular biosynthesis protein
SCN18_25_8_15_R2_B_scaffold_3951_6
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5329..6126
DNA (798bp) protein (266aa)
Exopolysaccharide production protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGV4_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL32808.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
exopolysaccharide production protein
SCN18_25_8_15_R2_B_scaffold_3951_7
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6211..7296
DNA (1086bp) protein (362aa)
Putative ammonia monooxygenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAA8_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL32809.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative ammonia monooxygenase
SCN18_25_8_15_R2_B_scaffold_3951_8
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7311..7616
DNA (306bp) protein (102aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL32810.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCN18_25_8_15_R2_B_scaffold_3951_9
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8250..8561)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00036E744B
ArsR family transcriptional regulator {ECO:0000313|EMBL:KFL32812.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ArsR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_3951_10
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8904..10076
DNA (1173bp) protein (391aa)
alkanesulfonate monooxygenase, FMNH(2)-dependent (EC:1.14.14.5)
Alkanesulfonate monooxygenase {ECO:0000256|HAMAP-Rule:MF_01229, ECO:0000256|SAAS:SAAS00023380}; EC=1.14.14.5 {ECO:0000256|HAMAP-Rule:MF_01229, ECO:0000256|SAAS:SAAS00023380};; FMNH2-dependent aliphatic sulfonate monooxygenase {ECO:0000256|HAMAP-Rule:MF_01229}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
Alkanesulfonate monooxygenase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y0D5_MESOW
SCN18_25_8_15_R2_B_scaffold_3951_11
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10079..11461
DNA (1383bp) protein (461aa)
Mlr5217 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98CB8_RHILO
hypothetical protein
Mlr5217 protein {ECO:0000313|EMBL:BAB51703.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCN18_25_8_15_R2_B_scaffold_3951_12
SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11532..12248)
DNA (717bp) protein (239aa)
3-mercaptopyruvate sulfurtransferase (EC:2.8.1.2); K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] id=7719702 bin=CNBR_ACT species=Bradyrhizobium sp. genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACT organism_group=Actinobacteria
sseA; 3-mercaptopyruvate sulfurtransferase (EC:2.8.1.2)
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
Displaying 12 items

View Taxonomy