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SCN18_25_8_15_R2_B_scaffold_1897

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1897_1
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..698
DNA (696bp) protein (232aa)
monooxygenase n=1 Tax=Burkholderia sp. JPY347 RepID=UPI000366F761
Monooxygenase {ECO:0000313|EMBL:KFL31344.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
monooxygenase
SCN18_25_8_15_R2_B_scaffold_1897_2
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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698..1882
DNA (1185bp) protein (395aa)
Amidohydrolase n=1 Tax=Phyllobacterium sp. YR531 RepID=J3CBK2_9RHIZ
Amidohydrolase {ECO:0000313|EMBL:KFL31343.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative amidohydrolase
SCN18_25_8_15_R2_B_scaffold_1897_3
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1879..2424
DNA (546bp) protein (182aa)
acetyltransferase n=1 Tax=Rhizobium leguminosarum RepID=UPI0003790F95
Acetyltransferase {ECO:0000313|EMBL:KGM32176.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
acetyltransferase
SCN18_25_8_15_R2_B_scaffold_1897_4
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2517..4292
DNA (1776bp) protein (592aa)
Amino acid ABC transporter ATP-binding protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2ACW5_RHIET
Amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:EGE57689.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
amino acid ABC transporter ATP-binding protein
SCN18_25_8_15_R2_B_scaffold_1897_5
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4475..5509
DNA (1035bp) protein (345aa)
Oxidoreductase protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JJU5_AGRRK
Oxidoreductase {ECO:0000313|EMBL:KFL31341.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
oxidoreductase
SCN18_25_8_15_R2_B_scaffold_1897_6
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5580..6497
DNA (918bp) protein (306aa)
Amino acid ABC transporter n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3H6J2_9RHIZ
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFL31340.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
amino acid ABC transporter
SCN18_25_8_15_R2_B_scaffold_1897_7
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6669..7295
DNA (627bp) protein (209aa)
Transcriptional regulator n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HNW2_9RHIZ
GntR family transcriptional regulator {ECO:0000313|EMBL:KKB13460.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_1897_8
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7429..8004
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. AP16 RepID=J2D6Z1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:GAJ94025.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1897_9
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8001..8951
DNA (951bp) protein (317aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
Biotin synthase n=2 Tax=Rhizobium radiobacter RepID=BIOB_AGRRK
biotin synthase
SCN18_25_8_15_R2_B_scaffold_1897_10
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9158..10162)
DNA (1005bp) protein (335aa)
rbsR3; LacI family transcriptional regulator (EC:5.1.1.1)
LacI family transcriptional regulator n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0FUV3_RHIML
Transcriptional regulator, LacI family {ECO:0000313|EMBL:CDP52076.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
SCN18_25_8_15_R2_B_scaffold_1897_11
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10424..12004
DNA (1581bp) protein (527aa)
Family 5 extracellular solute-binding protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2J430_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KFL25218.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
ABC transporter substrate-binding protein
SCN18_25_8_15_R2_B_scaffold_1897_12
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12058..12999
DNA (942bp) protein (314aa)
ABC transporter permease protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TPE5_9PROT
Dipeptide transport system permease protein DppB {ECO:0000313|EMBL:CDP52945.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
putative ABC transporter permease protein
SCN18_25_8_15_R2_B_scaffold_1897_13
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13003..13875
DNA (873bp) protein (291aa)
ABC transporter permease n=1 Tax=Oceanibaculum indicum P24 RepID=K2K497_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KFL25220.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
putative ABC transporter permease protein
SCN18_25_8_15_R2_B_scaffold_1897_14
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13872..14885
DNA (1014bp) protein (338aa)
Putative oligopeptide ABC transporter (ATP binding protein) n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TNZ6_9BRAD
Oligopeptide transport ATP-binding protein OppD {ECO:0000313|EMBL:CDP52947.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
peptide ABC transporter ATPase
SCN18_25_8_15_R2_B_scaffold_1897_15
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14882..15895
DNA (1014bp) protein (338aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Nesterenkonia alba RepID=UPI0003B4C2CE
Oligopeptide transport ATP-binding protein OppF {ECO:0000313|EMBL:CDP52948.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
oligopeptide/dipeptide ABC transporter ATPase
SCN18_25_8_15_R2_B_scaffold_1897_16
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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15888..16604
DNA (717bp) protein (239aa)
Hydrolase, alpha n=1 Tax=Pseudomonas putida CSV86 RepID=L1LST8_PSEPU
Alpha/beta hydrolase fold {ECO:0000313|EMBL:CDP52949.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
putative alpha/beta hydrolase
Displaying 16 items

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