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SCN18_25_8_15_R2_B_scaffold_2065

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2065_1
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..613
DNA (612bp) protein (204aa)
UPI0003CF36E5 related cluster n=1 Tax=unknown RepID=UPI0003CF36E5
Uncharacterized protein {ECO:0000313|EMBL:ESY38331.1}; TaxID=1287270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC386A00.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2065_2
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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636..1313
DNA (678bp) protein (226aa)
SCN18_25_8_15_R2_B_scaffold_2065_3
unknown

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1632..1880
DNA (249bp) protein (83aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_2065_4
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1873..2961)
DNA (1089bp) protein (363aa)
Flagellar motor protein MotB n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7F798_9RHIZ
Flagellar motor protein MotB {ECO:0000313|EMBL:KFL28028.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
OmpA/MotB domain-containing protein
SCN18_25_8_15_R2_B_scaffold_2065_5
Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3108..3938)
DNA (831bp) protein (277aa)
putative AraC family transcriptional regulator n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248AE90
Uncharacterized protein {ECO:0000313|EMBL:AJR26982.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
putative AraC family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_2065_6
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4407..5984
DNA (1578bp) protein (526aa)
ABC transporter substrate-binding protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI0003661318
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EPE94096.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
Oligopeptide-binding protein appA
SCN18_25_8_15_R2_B_scaffold_2065_7
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6047..6715
DNA (669bp) protein (223aa)
Putative glutathione S-transferase (EC:2.5.1.18)
Putative glutathione S-transferase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F2I6_9PROT
Disulfide-bond oxidoreductase YfcG {ECO:0000313|EMBL:GAK32722.1}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
SCN18_25_8_15_R2_B_scaffold_2065_8
Advenella mimigardefordensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7236..8282)
DNA (1047bp) protein (349aa)
Luciferase family protein n=1 Tax=Yersinia rohdei ATCC 43380 RepID=C4UV54_YERRO
putative FMN-dependent luciferase family oxidoreductase
Putative FMN-dependent luciferase family oxidoreductase {ECO:0000313|EMBL:AHG65622.1}; TaxID=1247726 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella mimigardefordensis DPN7.;"
SCN18_25_8_15_R2_B_scaffold_2065_trna_2
unknown

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comp(8532..8603)
DNA (72bp)
transferRNA Val
SCN18_25_8_15_R2_B_scaffold_2065_trna_1
unknown

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comp(8636..8707)
DNA (72bp)
transferRNA Val
SCN18_25_8_15_R2_B_scaffold_2065_9
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8821..9180)
DNA (360bp) protein (120aa)
MFS transporter n=1 Tax=Kaistia granuli RepID=UPI000379B755
MFS transporter {ECO:0000313|EMBL:KFL29222.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Response regulator
SCN18_25_8_15_R2_B_scaffold_2065_10
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9382..10278
DNA (897bp) protein (299aa)
N-formylglutamate amidohydrolase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC89_PELHB
N-formylglutamate amidohydrolase {ECO:0000313|EMBL:KKB77164.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
N-formylglutamate amidohydrolase
SCN18_25_8_15_R2_B_scaffold_2065_11
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10588..11385
DNA (798bp) protein (266aa)
Inositol monophosphatase family protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC90_PELHB
Inositol monophosphatase {ECO:0000313|EMBL:KFL29221.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
inositol monophosphatase
SCN18_25_8_15_R2_B_scaffold_2065_12
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11396..12370)
DNA (975bp) protein (325aa)
Lysophospholipase L2 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC91_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL29218.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
lysophospholipase L2
SCN18_25_8_15_R2_B_scaffold_2065_13
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12772..13227
DNA (456bp) protein (152aa)
Heat shock protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC92_PELHB
Molecular chaperone {ECO:0000313|EMBL:KFL29217.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
heat shock protein
SCN18_25_8_15_R2_B_scaffold_2065_14
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13422..13895
DNA (474bp) protein (158aa)
DNA starvation/stationary phase protection protein Dps n=1 Tax=Hoeflea sp. 108 RepID=UPI000361DFE5
DNA-binding protein {ECO:0000313|EMBL:KKC41044.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
dps; DNA oxidation protective protein, not DNA-binding
SCN18_25_8_15_R2_B_scaffold_2065_15
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14460..15365
DNA (906bp) protein (302aa)
Glutamate synthase (NADPH) large chain n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC94_PELHB
Glutamate synthase {ECO:0000313|EMBL:KFL29214.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
glutamate synthase (NADPH) large chain
Displaying 17 items

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