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SCN18_25_8_15_R2_B_scaffold_2106

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2106_1
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..750)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LNJC380A00 RepID=V7GKF2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL32319.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
LysR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_2106_2
unknown

Not on your lists

932..1093
DNA (162bp) protein (54aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_2106_3
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1093..2088
DNA (996bp) protein (332aa)
aldo/keto reductase n=1 Tax=Rhizobium meliloti RepID=UPI0003801037
Aldo/keto reductase {ECO:0000313|EMBL:KFL32320.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
NADP-dependent oxidoreductase domain-containing protein
SCN18_25_8_15_R2_B_scaffold_2106_4
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2081..3079
DNA (999bp) protein (333aa)
Aldo/keto reductase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HSW0_PARL1
Uncharacterized protein {ECO:0000313|EMBL:KFL32321.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
aldo/keto reductase
SCN18_25_8_15_R2_B_scaffold_2106_5
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3132..3482)
DNA (351bp) protein (117aa)
Rare lipoprotein A n=1 Tax=Pseudanabaena sp. PCC 7367 RepID=K9SG85_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KFL32322.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
rare lipoprotein A
SCN18_25_8_15_R2_B_scaffold_2106_6
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4060..4695)
DNA (636bp) protein (212aa)
Alkyl hydroperoxide reductase subunit C-like protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RDW4_PELHB
Peroxidase {ECO:0000313|EMBL:KFL32323.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
alkyl hydroperoxide reductase
SCN18_25_8_15_R2_B_scaffold_2106_7
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4855..5376)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=J0HB27_RHILT
CREA protein {ECO:0000313|EMBL:KKB07943.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
CREA protein
SCN18_25_8_15_R2_B_scaffold_2106_8
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5458..6237)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000364CA32
Amino acid ABC transporter {ECO:0000313|EMBL:KFL32324.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
polar amino acid ABC transporter permease
SCN18_25_8_15_R2_B_scaffold_2106_9
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6454..7245)
DNA (792bp) protein (264aa)
Extracellular solute-binding protein family 3 n=1 Tax=Marinomonas sp. (strain MWYL1) RepID=A6W2K6_MARMS
Amino acid ABC transporter {ECO:0000313|EMBL:KFL32325.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
extracellular solute-binding protein
SCN18_25_8_15_R2_B_scaffold_2106_10
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7445..7813)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI0003820992
Uncharacterized protein {ECO:0000313|EMBL:KFL32326.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2106_11
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7879..8202)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00038035B2
Uncharacterized protein {ECO:0000313|EMBL:KFL32327.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2106_12
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8199..8660)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI00037EEFB4
Uncharacterized protein {ECO:0000313|EMBL:KFL32328.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2106_13
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8769..9248)
DNA (480bp) protein (160aa)
glutathione peroxidase (EC:1.11.1.9)
Glutathione peroxidase n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K4Y9_AZOSB
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCN18_25_8_15_R2_B_scaffold_2106_14
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9356..12022)
DNA (2667bp) protein (889aa)
Putative penicillin-binding protein 1A n=1 Tax=uncultured bacterium 1062 RepID=B8R8Z2_9BACT
Multimodular transpeptidase-transglycosylase {ECO:0000313|EMBL:KFC68838.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
multimodular transpeptidase-transglycosylase
SCN18_25_8_15_R2_B_scaffold_2106_15
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12343..13020
DNA (678bp) protein (226aa)
Biotin transporter n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3J1A4_9RHIZ
Biotin transporter {ECO:0000313|EMBL:EMG52741.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
bioM; ATP-binding protein BioM
SCN18_25_8_15_R2_B_scaffold_2106_16
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13017..13634
DNA (618bp) protein (206aa)
Cobalt/biotin ABC transporter permease n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3KC34_9RHIZ
Cobalt/biotin ABC transporter permease {ECO:0000313|EMBL:EMG52740.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
bioN; Putative biotin transporter, permease protein BioN
SCN18_25_8_15_R2_B_scaffold_2106_17
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13646..14206
DNA (561bp) protein (187aa)
Biotin transporter n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3KD30_9RHIZ
Biotin transporter {ECO:0000313|EMBL:EMG52739.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
BioY family protein
SCN18_25_8_15_R2_B_scaffold_2106_18
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14282..14590
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HU89_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK55725.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2106_19
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14631..15149
DNA (519bp) protein (173aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL32331.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCN18_25_8_15_R2_B_scaffold_2106_20
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15228..16250)
DNA (1023bp) protein (341aa)
alkanal monooxygenase n=1 Tax=Ochrobactrum anthropi RepID=UPI000288509F
Alkane 1-monooxygenase {ECO:0000313|EMBL:KFL32332.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
luciferase family protein
SCN18_25_8_15_R2_B_scaffold_2106_21
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16407..16709
DNA (303bp) protein (101aa)
PhnA-like protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J712_POLGS
PhnA protein {ECO:0000313|EMBL:KFL32333.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
PhnA-like protein
SCN18_25_8_15_R2_B_scaffold_2106_22
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16792..17547)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Bacillus cereus R309803 RepID=C2QDL8_BACCE
Phosphoesterase {ECO:0000313|EMBL:EWS80432.1}; TaxID=396014 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium phenoliresistens.;"
serine/threonine protein phosphatase
SCN18_25_8_15_R2_B_scaffold_2106_23
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17629..17913)
DNA (285bp) protein (95aa)
wbbJ; nodulation protein L (EC:2.3.1.-)
nodulation protein L n=1 Tax=Spirosoma panaciterrae RepID=UPI000370ED3A
Acetyltransferase {ECO:0000313|EMBL:KEQ20953.1}; TaxID=1598 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri.;"
SCN18_25_8_15_R2_B_scaffold_2106_24
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17968..18921)
DNA (954bp) protein (318aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
DNA gyrase subunit B n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8K0_PELHB
DNA gyrase subunit B
Displaying 24 items

View Taxonomy