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SCN18_25_8_15_R2_B_scaffold_2113

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2113_1
unknown

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comp(1..225)
DNA (225bp) protein (75aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_2113_2
unknown

Not on your lists

361..630
DNA (270bp) protein (90aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_2113_3
Nitrosospira multiformis_SCNPILOT_SOLID_1_TRIM150_Nitrosospira_54_27, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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661..1941
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000364B7B2
Phage major capsid protein, HK97 family {ECO:0000313|EMBL:EEX10092.1}; TaxID=644107 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Silicibacter lacuscaerulensis ITI-1157.;"
SCN18_25_8_15_R2_B_scaffold_2113_4
unknown

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2053..2526
DNA (474bp) protein (158aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_2113_5
SCNPILOT_SOLID_1_TRIM150_Phage_5, SCNPILOT_SOLID_1_TRIM150_Phage_5, SCNPILOT_SOLID_1_TRIM150_Phage_5, SCNPILOT_SOLID_1_TRIM150_Phage_5, SCNPILOT_SOLID_1_TRIM150_Phage_5, Phage

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2523..3098
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Sinorhizobium medicae RepID=UPI00037B0116
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ70109.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCN18_25_8_15_R2_B_scaffold_2113_6
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3110..4927
DNA (1818bp) protein (606aa)
Tail length tape measure protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J5P2_POLGS
tail length tape measure protein
Tail length tape measure protein {ECO:0000313|EMBL:ADZ70126.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCN18_25_8_15_R2_B_scaffold_2113_7
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5221..5838
DNA (618bp) protein (206aa)
50S ribosomal protein L25 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R695_PELHB
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
50S ribosomal protein L25
SCN18_25_8_15_R2_B_scaffold_2113_8
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5946..6644
DNA (699bp) protein (233aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00037D4C8C
peptidyl-tRNA hydrolase
SCN18_25_8_15_R2_B_scaffold_2113_9
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6987..8354)
DNA (1368bp) protein (456aa)
Putative alpha-galactosidase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVA9_RHITR
Alpha-galactosidase {ECO:0000313|EMBL:KKB80159.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
putative alpha-galactosidase
SCN18_25_8_15_R2_B_scaffold_2113_10
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8375..10039)
DNA (1665bp) protein (555aa)
peptide ABC transporter ATPase n=1 Tax=Kaistia granuli RepID=UPI00038240E1
Microcin ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFL31969.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
nickel-transporting ATPase
SCN18_25_8_15_R2_B_scaffold_2113_11
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10050..11237)
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037E9805
ABC transporter permease {ECO:0000313|EMBL:KFL31970.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
oligopeptide ABC transporter permease
SCN18_25_8_15_R2_B_scaffold_2113_12
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11234..12244)
DNA (1011bp) protein (337aa)
ABC transporter permease n=1 Tax=Kaistia granuli RepID=UPI00036B282D
ABC transporter permease {ECO:0000313|EMBL:KKB80161.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
appB2; oligopeptide transport system permease AppB
SCN18_25_8_15_R2_B_scaffold_2113_13
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12421..14448)
DNA (2028bp) protein (676aa)
Periplasmic alpha-galactoside-binding protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HT53_9RHIZ
Periplasmic alpha-galactoside-binding protein {ECO:0000313|EMBL:KKB80475.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
periplasmic alpha-galactoside-binding protein
SCN18_25_8_15_R2_B_scaffold_2113_14
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14664..14945
DNA (282bp) protein (94aa)
Regulator of melibiose operon n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CK10_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KFL31973.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
AraC family transcriptional regulator
Displaying 14 items

View Taxonomy