ggKbase home page

SCN18_25_8_15_R2_B_scaffold_2606

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2606_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1238)
DNA (1236bp) protein (412aa)
Major facilitator superfamily MFS_1 n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IG00_BEII9
MFS transporter {ECO:0000313|EMBL:KFL31877.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
major facilitator transporter
SCN18_25_8_15_R2_B_scaffold_2606_2
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1471..2214
DNA (744bp) protein (248aa)
ABC transporter ATP-binding protein (EC:3.6.3.-)
Daunorubicin resistance ATP-binding protein DrrA n=1 Tax=Ahrensia sp. R2A130 RepID=E0MLQ5_9RHOB
ABC transporter {ECO:0000313|EMBL:KFL31878.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCN18_25_8_15_R2_B_scaffold_2606_3
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2214..3743
DNA (1530bp) protein (510aa)
permease n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037864D1
Uncharacterized protein {ECO:0000313|EMBL:KFL31879.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2606_4
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3745..4212
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI0003781564
Uncharacterized protein {ECO:0000313|EMBL:KFL31880.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
N-acetyltransferase GCN5
SCN18_25_8_15_R2_B_scaffold_2606_5
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4209..4382)
DNA (174bp) protein (58aa)
UPF0391 membrane protein Cseg_3699 n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VNP8_CAUST
UPF0391 membrane protein VW35_06520 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2606_6
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4447..5367)
DNA (921bp) protein (307aa)
Flagellar motor rotation protein MotB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9Q1_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL31882.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
flagellar motor rotation protein MotB
SCN18_25_8_15_R2_B_scaffold_2606_7
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5439..6302)
DNA (864bp) protein (288aa)
flagellar motor protein MotA n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI000346DEDF
Flagellar motor protein MotA {ECO:0000313|EMBL:KFL31883.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
MotA/TolQ/ExbB proton channel
SCN18_25_8_15_R2_B_scaffold_2606_8
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6492..6923
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. Pop5 RepID=K0VGT1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL31884.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2606_9
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6970..8073
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RMS8_9PROT
RNA methyltransferase {ECO:0000313|EMBL:KFL31885.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
RNA methyltransferase
SCN18_25_8_15_R2_B_scaffold_2606_10
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8216..8584
DNA (369bp) protein (123aa)
Response regulator receiver protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UL73_METS4
Uncharacterized protein {ECO:0000313|EMBL:KFL31886.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
response regulator receiver protein
SCN18_25_8_15_R2_B_scaffold_2606_11
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8588..8986)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Gordonia soli NBRC 108243 RepID=M0QPS0_9ACTO
Polyketide cyclase {ECO:0000313|EMBL:KJR12211.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2606_12
SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, Bacteria

Not on your lists

comp(8968..9186)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI0003676AB3
ArsR family transcriptional regulator {ECO:0000313|EMBL:KDB05025.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
ArsR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_2606_13
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9694..10302
DNA (609bp) protein (203aa)
membrane protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B771D8
Uncharacterized protein {ECO:0000313|EMBL:KFL31887.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2606_14
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10299..10691)
DNA (393bp) protein (131aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=2 Tax=Mycobacterium RepID=A1UNY2_MYCSK
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:KKB10122.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCN18_25_8_15_R2_B_scaffold_2606_15
SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10688..11023)
DNA (336bp) protein (112aa)
Transcriptional regulator, ArsR family n=1 Tax=Burkholderia sp. (strain 383) RepID=Q396L5_BURS3
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ABB11596.1}; TaxID=482957 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia lata (strain ATCC 17760 / LMG 22485 / NCIMB 9086 / R18194; / 383).;"
SCN18_25_8_15_R2_B_scaffold_2606_16
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11112..11999)
DNA (888bp) protein (296aa)
magnesium transporter n=1 Tax=Rhizobium meliloti RepID=UPI0003602E63
Magnesium transporter {ECO:0000313|EMBL:KFL31888.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
corA; magnesium/cobalt transport protein, CorA
Displaying 16 items

View Taxonomy