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SCN18_25_8_15_R2_B_scaffold_1351_23

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: 18228..18920

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=RL1_METPB similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 230.0
  • Bit_score: 376
  • Evalue 1.50e-101
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 230.0
  • Bit_score: 430
  • Evalue 9.40e-118
rplA; 50S ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 78.7
  • Coverage: 230.0
  • Bit_score: 376
  • Evalue 4.20e-102

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Taxonomy

SCNPILOT_EXPT_1000_BF_Devosia_62_26 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 693
ATGGCAAAGATCGCAAAGAAGGTCGCCGCAGGCCGCGAAGGCATCGACCGCAACAAGCTGTACACGCTCGAAGCAGCTGTGAAGCTCGTCAAGTCGAAGGCTTCGGCCAAGTTCGACGAAACCGTTGAAATCGCAATGAACCTCGGCGTTGATCCGCGTCACGCTGACCAGATGGTTCGTGGCGTTGTGTCGCTGCCCAACGGCACCGGTAAGACCGTTCGCGTCGCCGTGTTCGCCCGTGGCGCCAAGGCTGACGAAGCCAAGGCCGCCGGTGCAGACATCGTCGGCGCAGAAGACCTCCTGGAAATCATCCAGGGCGGCAAGCTCGATTTCGATCGCTGCATTGCTACCCCGGACATGATGCCGCTGGTCGGCCGTCTCGGTAAGATCCTCGGGCCGCGCAACCTGATGCCGAACCCGAAGGTTGGCACCGTGACCATGGACGTCAAGGGTGCTGTCGGTGCTGCCAAGGGCGGCGCTGTTGAATACCGCGTCGAAAAGGCTGGTATCATCCATGCCGGTATCGGCAAGGTCTCGTTCTCGGAAGAAGCACTTCTCCAGAACATCAAGGCCTTCACCGACGCTGTCGTGAAGTCCAAGCCTGCTGGCGCCAAGGGCACCTACGTCAAGAAGGTCGCCGTGTCGTCCACCATGGGCCCCGGTGTCCATGTCGAGCCGGCTTCGGCTATCTAA
PROTEIN sequence
Length: 231
MAKIAKKVAAGREGIDRNKLYTLEAAVKLVKSKASAKFDETVEIAMNLGVDPRHADQMVRGVVSLPNGTGKTVRVAVFARGAKADEAKAAGADIVGAEDLLEIIQGGKLDFDRCIATPDMMPLVGRLGKILGPRNLMPNPKVGTVTMDVKGAVGAAKGGAVEYRVEKAGIIHAGIGKVSFSEEALLQNIKAFTDAVVKSKPAGAKGTYVKKVAVSSTMGPGVHVEPASAI*