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SCN18_25_8_15_R2_B_scaffold_1675_19

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: comp(14449..15528)

Top 3 Functional Annotations

Value Algorithm Source
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 352.0
  • Bit_score: 662
  • Evalue 2.30e-187
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6U8_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 70.1
  • Coverage: 344.0
  • Bit_score: 477
  • Evalue 9.70e-132
YgjD/Kae1/Qri7 family, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA similarity KEGG
DB: KEGG
  • Identity: 70.1
  • Coverage: 344.0
  • Bit_score: 477
  • Evalue 2.80e-132

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Taxonomy

SCNPILOT_EXPT_1000_BF_Devosia_62_26 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1080
GTGACCGGGCAAGCGCAAGCCATCATTCTGGGTATCGAGACCAGCTGCGATGAAACCGCCGCATCCGTGGTGGTGCGGGATCAATCCGGCCATGGCACCATTCGTTCCAACGTGGTGCGCAGCCAGCTCGACGAGCATGCCGCCTTTGGTGGCGTGGTGCCAGAGCTCGCCGCACGCGCCCATGTCGAATGGCTCGACCACATCATTGCCCAGGCGATCGAGGAGGCCGGCATCGCCCTGCGCGATATTGACGCGGTCGCGGCCACCGCAGGCCCGGGCCTCATCGGCGGCGTGCTCGTCGGCCTCACCACCGCCAAGGCACTTGCCGCTTCGCTCGACAAACCTCTTATTGCCGTTAATCACCTCGAAGGCCACGCTTTGACCGCGCGGCTGACCAACGGGGTGAAGTTTCCCTACCTGATGCTGCTCGTTTCCGGCGGCCACAGCCAGTTCGTGCTGGTGCGCGGCGTCGGCGACTATGAGCGCTGGGGCGGCACGATTGACGACGCGCTGGGCGAAGCCTTTGACAAGGTCGCGAAACTTTTATCGCTCGGCCACCCCGGCGGTCCGGCCGTCGAGCGCATTGCCCGCGAGGGCGACCCCAAACGCTTCAAGTTTCCCAAACCGCTGCTGCGCGAAGAACGTCTCGATTTCTCCTTCTCGGGCCTCAAGACTGCCGTGCGCCTGCAGGCCGAAGCACTGGCGCCCCTGACGGATCAGGATGTTGCCGATATTGCCGCGAGCTTTCAGGAAACCGTGGCGCAGATCGTCGGCCATCGGGCCCGCCAGGCGCTCGAAAAGTTTGCAGCCGAATTTCCAGGCGAACCGATTCGCCTCGTCGTCGCCGGCGGCGTTGCCGCCAATCGGCGCATCGCCGAGGCCCTGCAGGCACCCTGCACCGCGTTCGGCGCTGAACTTATCGTGCCCCCCATTGCCCTTTGTACCGATAATGGCGCCATGATCGCCTGGGCCGGCGCCGAACGGCTGGCCCTTGAGGATACCGACAGCCTTGCCATCGCCGCGCGTCCGCGCTGGCCTTTGCAGGATGAAGACATGCGGGTGAAAAAGCATGGCGCTTGA
PROTEIN sequence
Length: 360
VTGQAQAIILGIETSCDETAASVVVRDQSGHGTIRSNVVRSQLDEHAAFGGVVPELAARAHVEWLDHIIAQAIEEAGIALRDIDAVAATAGPGLIGGVLVGLTTAKALAASLDKPLIAVNHLEGHALTARLTNGVKFPYLMLLVSGGHSQFVLVRGVGDYERWGGTIDDALGEAFDKVAKLLSLGHPGGPAVERIAREGDPKRFKFPKPLLREERLDFSFSGLKTAVRLQAEALAPLTDQDVADIAASFQETVAQIVGHRARQALEKFAAEFPGEPIRLVVAGGVAANRRIAEALQAPCTAFGAELIVPPIALCTDNGAMIAWAGAERLALEDTDSLAIAARPRWPLQDEDMRVKKHGA*