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SCN18_25_8_15_R2_B_scaffold_1675_20

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: 15606..16544

Top 3 Functional Annotations

Value Algorithm Source
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 312.0
  • Bit_score: 523
  • Evalue 1.90e-145
Porphobilinogen deaminase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6U9_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 55.3
  • Coverage: 311.0
  • Bit_score: 304
  • Evalue 9.80e-80
porphobilinogen deaminase similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 311.0
  • Bit_score: 304
  • Evalue 2.80e-80

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Taxonomy

SCNPILOT_EXPT_1000_BF_Devosia_62_26 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGCAATCGCCAGCCCCCTTTGCCCGGATCGGAACGCGCGGCAGCCCGCTGGCGATGGCCCAGGCAAAACTGGTGCGCAGCCTGCTGTCCGCAGCGCATGGAGTCAGTGAAGACGATATCGAGATCGATGTGTTCCTGACCGGTGGCGATCGCAGCCAGGACGCCAATCTTTCGCTCGCGACCATTGGCGGCAAGGGCGTCTTCACCAAGGAAATCGACGAGGCGCTGCTTTCGGGGCGCGTCGACATCGGTGTGCATTCAAGCAAGGACGTGGCCACGGGCCTGCCGGCCGGAATGACGCTGGCGGCTTTTCTTGAGCGCGAAGACGTGCGCGACGCTTTTCTCTCCCTCAAGGCACAGAATATCGAGGGGCTGCCGCAGGGCGCGCGCTTCGGCACGTCCTCGATTCGGCGTGCGGCCCAGGCGCTGCGGCTTCGCCCTGACCTTCAGATCGTGCCCTTCCGCGGCAATGTGCATACGCGGTTGCAAAAGCTCGCCGATGATGTCGCCGACGCAACTCTGCTCGCCATGGCCGGGCTCAATCGGCTGGGCGAAGCACACCGCGCCACTGGTGTGCTCGATCGGGATCATTTTATGCCAGCCCCGGCTCAAGGGGCTATCGGGCTTGCCGTCCGCAGCGATGATCGTCGCATGCTTGATGTGATCGCAGCGCTCGATCACGCCCAGACCCACGCCGCCATCACCGCCGAGCGGGCTATGCTGGCCGTGCTCGACGGGTCATGCAGGACGCCGGTTGGCGCCTTGACGACGGGGCAGGGCGCCGGCCTGACGCTGCGCGGGGAAATTCTCAGCCTTGATGGCCAGACGACGTTCCGGGCCGAGGCGAGCGGTAGCGATGCGCAGGCGCTCGGCGAAAAGGTCGGTCGGGCTCTCCTTGATCAGGCAGGTCCGGACTGGCTGAAGCAGTGGATGGCCTAG
PROTEIN sequence
Length: 313
MQSPAPFARIGTRGSPLAMAQAKLVRSLLSAAHGVSEDDIEIDVFLTGGDRSQDANLSLATIGGKGVFTKEIDEALLSGRVDIGVHSSKDVATGLPAGMTLAAFLEREDVRDAFLSLKAQNIEGLPQGARFGTSSIRRAAQALRLRPDLQIVPFRGNVHTRLQKLADDVADATLLAMAGLNRLGEAHRATGVLDRDHFMPAPAQGAIGLAVRSDDRRMLDVIAALDHAQTHAAITAERAMLAVLDGSCRTPVGALTTGQGAGLTLRGEILSLDGQTTFRAEASGSDAQALGEKVGRALLDQAGPDWLKQWMA*