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SCN18_25_8_15_R2_B_scaffold_1364_1

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: 3..509

Top 3 Functional Annotations

Value Algorithm Source
Putrescine-binding periplasmic protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REC4_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 167.0
  • Bit_score: 213
  • Evalue 9.40e-53
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.3
  • Coverage: 168.0
  • Bit_score: 322
  • Evalue 3.40e-85
putrescine ABC transporter putrescine-binding protein PotF similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 167.0
  • Bit_score: 213
  • Evalue 2.70e-53

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Taxonomy

SCNPILOT_EXPT_1000_BF_Devosia_62_26 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
AGCGCAGACGACCTCGCCAAGGCCGAGGAACTGCTCAATTCGATCAAGCCCTACATCCGCTACTTCCACTCGTCGCAATATATCGATGACCTGGGCAATGGCGAAATCTGTATCGCGCTCGGCTATTCCGGTGACGTCTTCATCGCTGCGGACGCTGCGGCCAATGCCGACCGGGGCAATGAAGTCACCTACCTGATCCCCAAGGAAGGCGCCGCGACGCTCTTCGACTTCCTGGCGATCCCGATCGATGCCCCGCATCCGGACAACGCTCACAAGTTCATCAACTACATCCTCGAACCCCAGGTCGTGGCTGCGATCACCAATTACGTGTTCTACGCCAACCCCAACCTGCCGGCCCTCGAGTTTGTATCTGAGGAAGTCAAGTCGAACCCGGGCATCTACCCGCCCGCCGAGACCATTGCCAAGGCATTCGTCATGAAGGCGCACACGCCTGATTTCGAAGAGCTCTTGACCCGCACCTGGACCCGCATCAAAACCGGCCAGTAA
PROTEIN sequence
Length: 169
SADDLAKAEELLNSIKPYIRYFHSSQYIDDLGNGEICIALGYSGDVFIAADAAANADRGNEVTYLIPKEGAATLFDFLAIPIDAPHPDNAHKFINYILEPQVVAAITNYVFYANPNLPALEFVSEEVKSNPGIYPPAETIAKAFVMKAHTPDFEELLTRTWTRIKTGQ*