ggKbase home page

SCN18_25_8_15_R2_B_scaffold_1364_20

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: comp(19491..20852)

Top 3 Functional Annotations

Value Algorithm Source
Lipid A core-O-antigen ligase-like enyme n=1 Tax=Rhizobium sp. CF122 RepID=J2I1M8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 59.8
  • Coverage: 413.0
  • Bit_score: 497
  • Evalue 1.10e-137
Polymerase {ECO:0000313|EMBL:KFL29957.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.1
  • Coverage: 441.0
  • Bit_score: 679
  • Evalue 3.00e-192
lipid A core-O-antigen ligase-like enyme similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 447.0
  • Bit_score: 501
  • Evalue 2.20e-139

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Devosia_65_23 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1362
ATGGCCGGATCAAGTCCTTGGCGGTGGGAGAGTTTGTTGTCTGAGTCAGGTGTGCAGACCTACACGCCCCAGGGGGGCTGGTTGGCGATCACGCTGTTCGTCATGATCTTCTGCTACTTCTGGATCGGCCTCGATCCTCTGCCCGATCCCCAAGCGGGGTCCGCGCTCGTTGCCTATGGCGATAGTTCCAACGCCTTTAACCAGTTGGTCGTGCTGGTCATGTCGGTCATGGTGATGTCCATGCTCGCACTGCATCCCGGGCGCGAACTGGTGCTCAAGGCCTATGTGCCGCTGATGATCATTTTTGGTTGGCTGGCGCTGACAATCCTCTTCTCCGACACGCCGGACAGTGCCCTGCGCCGCACCATCTATTCGGTGCTGGTCTGCCTCTGCGCCAGCGCTGTGCTGCTGCTGCCGCGGGACAATGTGCAGTTCGCCAAGCTCGCTGGCTTTTGTCTGTTGCTGGCCGTCGGGCTTTCCTATTTCGGCGTTTTCGTCATGCCGGCGCGCGGCGTGCATCAGGCAACGGATGCTTTGGAACAGGCCCTCGCGGGCGATTGGCGCGGCCATTTCGGCCACAAGAACGTCGCCGCAGCGGCGATGGTCTTTGCCGTTTTCTTCGGCCTCTATCTGCTGCGGATGCGTCTTTTCTGGAGCGGCATTCTGCTGACGGTGCTGGCCGGTATCTTCCTCTTGAATTCGGGCGGTAAGACGTCAGCCGCCATGTTGCCGGCGGTGCTGGTCGTCGTCTGGATTTTCGAACGGATCGGGATATTCAGACTGCTGATGGTGGCCGGAGGCCTGGCGTTGATCAACTTCGTCACGCTGTCGGTGGCCGTGTCGCCGCCGATCCAGGCTTTCCTGACTGGCATCGGCATCGATGCGACGTTCACCGACCGCACCTCCATCTGGGAACTGGCGCTGTCGGCGATCGCCAACCGCCCCTGGACCGGCTACGGCTTCCAGTCCTTTTGGCAGACCGATGCGCTCTTTTACGGCGGTCAGTCTGCCTCGACCTGGGCGGTGACGGCAGCCAATGCGCACAATGCCTATCTCGACCAGTTGATTAATGGCGGCTGGCCGTTTCTGATCCTGGTCGTGACCTGGATCGTCATTTTGCCGTGCATCCACGCGTCGGTTGCCATGGCGCGCGCCACCGACCCGGACCTGACGCGGCTCTATGTCCGGATCTGGATGTTCGGCCTTTTCAGCAGCTGTTTCGAGAGCACGTTCTTCGGCAATAGCGGGCCGCTGTGGTTTACCATGTTGATCGCTGTTTTTGGCCTTCGCTTGCAAGCCTATGCCAATCTGGTGGAGAACCCAGAGGTGGATGTGCCGGGGCTGCGGCCCGCGCCCTCCTGA
PROTEIN sequence
Length: 454
MAGSSPWRWESLLSESGVQTYTPQGGWLAITLFVMIFCYFWIGLDPLPDPQAGSALVAYGDSSNAFNQLVVLVMSVMVMSMLALHPGRELVLKAYVPLMIIFGWLALTILFSDTPDSALRRTIYSVLVCLCASAVLLLPRDNVQFAKLAGFCLLLAVGLSYFGVFVMPARGVHQATDALEQALAGDWRGHFGHKNVAAAAMVFAVFFGLYLLRMRLFWSGILLTVLAGIFLLNSGGKTSAAMLPAVLVVVWIFERIGIFRLLMVAGGLALINFVTLSVAVSPPIQAFLTGIGIDATFTDRTSIWELALSAIANRPWTGYGFQSFWQTDALFYGGQSASTWAVTAANAHNAYLDQLINGGWPFLILVVTWIVILPCIHASVAMARATDPDLTRLYVRIWMFGLFSSCFESTFFGNSGPLWFTMLIAVFGLRLQAYANLVENPEVDVPGLRPAPS*