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SCN18_25_8_15_R2_B_scaffold_1365_20

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: 15148..15837

Top 3 Functional Annotations

Value Algorithm Source
type VI secretion protein n=1 Tax=Sinorhizobium medicae RepID=UPI0003728C83 similarity UNIREF
DB: UNIREF100
  • Identity: 63.6
  • Coverage: 225.0
  • Bit_score: 300
  • Evalue 8.00e-79
Type IV secretion system protein virB8 {ECO:0000313|EMBL:KFC70199.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 229.0
  • Bit_score: 445
  • Evalue 2.80e-122
virB8-2; conjugal transfer protein similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 225.0
  • Bit_score: 299
  • Evalue 5.00e-79

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGCCTAAAGCCGATTCAGGGCTCGTGACCTACTATCAGGACGGCCAACGCTGGGAAGAAGACATTTCGCGCCGCGATCGGCGTTCGCGCGCCGTCGCTTGGCTTATCGCAATGATCCTCGGTCTCGTCGCGGTGTGCAGCCTCTTGGTGTTGGCGATGTTGATGCCTCTCAAGACCTTTGAGCCCTACTTCGTGGAAGTCGATAAAACGACTGGCTACATGGAAGTCACTTCGGGGCTGACCCGCACCACGACATTGACAGAACAGCAGGCCGTTACCCAGGCCAATGTCGTGCGCTATATCCGTGCCCGGGAAAAATACGATCCATATGCCGTGTCGGAGAATTTCGGTCTGGCGCAATTGCTATCGACCGGTCGCGCCTCAGACGATTTGACCCGGCTTTACAGCAATACCAATCCAACCAATCCGACCAAGGTATACGGCACCAATCGGACTGTGGCCGTCGAAATCAAATCGGTGACCTTCCCCAATACCTCAACGGCATTGGTCCGGTTTTCGACCACCGAAACTGGCCCGGCCCAGCTGACGGTCAAACACTACATCTCAGTTGTCCGCTTCCGCTACACCGATACCCCCCTTCGCATGGAATGGCGCTTCGATAATCCGCTGGGATTCCAAGTCTATGAGTACCAGCGCGACCAAGAAACCGTGACGGCCGGGAGCCAATAG
PROTEIN sequence
Length: 230
MPKADSGLVTYYQDGQRWEEDISRRDRRSRAVAWLIAMILGLVAVCSLLVLAMLMPLKTFEPYFVEVDKTTGYMEVTSGLTRTTTLTEQQAVTQANVVRYIRAREKYDPYAVSENFGLAQLLSTGRASDDLTRLYSNTNPTNPTKVYGTNRTVAVEIKSVTFPNTSTALVRFSTTETGPAQLTVKHYISVVRFRYTDTPLRMEWRFDNPLGFQVYEYQRDQETVTAGSQ*