ggKbase home page

SCN18_25_8_15_R2_B_scaffold_1365_22

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: 16643..17902

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway, VirB10 component n=2 Tax=Rhizobium meliloti RepID=M4IFZ0_RHIML similarity UNIREF
DB: UNIREF100
  • Identity: 51.3
  • Coverage: 419.0
  • Bit_score: 424
  • Evalue 1.10e-115
Conjugative transfer protein TrbI {ECO:0000313|EMBL:KFC70201.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 419.0
  • Bit_score: 773
  • Evalue 8.20e-221
Type IV secretory pathway, VirB10 component similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 419.0
  • Bit_score: 424
  • Evalue 3.20e-116

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1260
ATGGAACGCGCGCCTGAACTGCAAGCTCTCCAGGGCAGCGGCGAAAGCGTCGTTGCTGACCGGAGCGTCAAAGGCAAGCAGCTCCTGGGCTTCGGCCTGCTGGGTCTGGTGGGGATTGGCGCTCTCTATCTCAACTTCACGGCGGGTAACACCGCACCGCGCGACATGCTCCAATCGGAAGAAGCCTTCAATACCGAGACATTCTCCCCACCTGGGTTCGTACGAGATTCAGAAGAAGCTGTTCTTGAGCCGGAAGTCGAACCTAATATCGTTGTCATACCGCCGCCCCCTCCACCGGCTGAGGCTGTCGAGCCTGAGCCAGATGTAGCCGAATTTACCGTACCCCCGCCCCCTCCCATGGTTCCGCCGCCACCAATGGTTGAGCCTACGCTGATCGTGCAGGAGCCGGAACCAGTGGTCGAAGAGGAATTTCCCGAGCGCTACCTGTCCGGCCTTGTCGTGATGGACGTTTCGGCGCCCGATAAGGCCCTGTCGGAACCTGCAGCCTTCGATGGCAATGCCAGGCCGCCTGCGATTGTATCGGGCACAGATTCAGCAAGCCAATATCTCGCAAGCTCGATTTCTCAAGAGGATCGTAGCGCTAGCGCACGCTCCCTTGAGCGGATTGACGCCCTTGTGCCCGAAGGCACGATGATTTCGGGCCTGCTCGAGACTGCCATCAATAGCGACCTGCCGGGGCAAATCCGGGCTGTGGTCAATGAAGACGTCTATTCGTTCGATGGCCGCCGCATTCTGATCCCGATCGGCTCTCGCCTGATTGGGGAATACCAGTCTGAAGTCACCCGCGGCCAAAGTCGGGTATTCGTGGTCTGGTCCCGTCTGATCCGCTCCGATGGAGTGTCCGTACGGCTTAATTCTATGGGCTCCGACAGCCTGGGCCGCTCGGGCATGACCGGGTTTGTCGATACCAAGTTCAAGGAGCGATTCACTTCGGCATTGATGCTGTCGGTTCTGGGCGGCGGCATCAACTACCTGACCGATTCCAGCGGCGAGCCTGAATTTGCAGACGGCGCAGATGACGAGCGTAGCGCCAGGCAAAAGGCGGCAGATGGCGTCGCTCAAACCATGGCAGATTTCATTTCGAGCGAAATCGAGGCCAATGCAAACCTCAAGCCGACGATCAGCATAGATCAAGGCGAGCGGGTTTTCGTCTATGTGCGCCAGGATCTCTCGTTTGCGGCGATGTACGAGGACCCCATAACGGAGGCAATGCGCCAAATCGTTAGTGAGCGGAGATAA
PROTEIN sequence
Length: 420
MERAPELQALQGSGESVVADRSVKGKQLLGFGLLGLVGIGALYLNFTAGNTAPRDMLQSEEAFNTETFSPPGFVRDSEEAVLEPEVEPNIVVIPPPPPPAEAVEPEPDVAEFTVPPPPPMVPPPPMVEPTLIVQEPEPVVEEEFPERYLSGLVVMDVSAPDKALSEPAAFDGNARPPAIVSGTDSASQYLASSISQEDRSASARSLERIDALVPEGTMISGLLETAINSDLPGQIRAVVNEDVYSFDGRRILIPIGSRLIGEYQSEVTRGQSRVFVVWSRLIRSDGVSVRLNSMGSDSLGRSGMTGFVDTKFKERFTSALMLSVLGGGINYLTDSSGEPEFADGADDERSARQKAADGVAQTMADFISSEIEANANLKPTISIDQGERVFVYVRQDLSFAAMYEDPITEAMRQIVSERR*