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SCN18_25_8_15_R2_B_scaffold_2336_13

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: 10469..11098

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimP n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA59_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 61.9
  • Coverage: 202.0
  • Bit_score: 256
  • Evalue 2.10e-65
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 209.0
  • Bit_score: 398
  • Evalue 3.60e-108
clustered with transcription termination protein NusA similarity KEGG
DB: KEGG
  • Identity: 61.9
  • Coverage: 202.0
  • Bit_score: 256
  • Evalue 5.80e-66

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Taxonomy

SCNPILOT_EXPT_1000_BF_Devosia_62_26 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGGCTTTCGATCTCACCGAGAAACGCTACATCAAGGAAACCGGCCTCGAAGCCCGAATTTCCCGCATTGTCGAGCCGGTTGCCAATGGGCTCGGCTATTCGCTCGTGCGCATCAAAATCACGCCGGAAAATGGCTGCACCCTGCAGATCATGGCCGAAGACGAGAATGGCCGCTTCAACATCAATGACTGCGAGGCCCTCTCTAAGGACCTGTCGCCGGTTCTCGATGTCGAAGATCCGATCGACCGGGAATATCATCTGGAAGTGTCTTCCGCCGGCATCGACCGCCCGCTGGTGCGCAAGCGTGACTTCGAGCGTTTCATGGGCCACGAGGCCAAGGTCGAGCTGGTCGACATGATCAATGGTCGCAAGCGCTTCCGCGGCGATATCGCAGCCGTCGACGACGAGGGTGTAACGATCCGGCTGCCCGATGCTCCGGGCGGCACCGATCCCAACCACAAGCTCAGCTTCCCCACCATTGCGGAAGCCAAGCTCGTGATGACCGACAGACTGATGGACATGGCGCGCGCCGAGCAGGAACTGCATCCGCTCGACGACGATGAGACCGAAACGGTCGAATATGCCGATGCCGACAATGACGACGACAACCTCTCCGAGGAGACGAAATAA
PROTEIN sequence
Length: 210
MAFDLTEKRYIKETGLEARISRIVEPVANGLGYSLVRIKITPENGCTLQIMAEDENGRFNINDCEALSKDLSPVLDVEDPIDREYHLEVSSAGIDRPLVRKRDFERFMGHEAKVELVDMINGRKRFRGDIAAVDDEGVTIRLPDAPGGTDPNHKLSFPTIAEAKLVMTDRLMDMARAEQELHPLDDDETETVEYADADNDDDNLSEETK*