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SCN18_25_8_15_R2_B_scaffold_2294_14

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: comp(8134..9009)

Top 3 Functional Annotations

Value Algorithm Source
tRNA 2-thiocytidine biosynthesis protein TtcA n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TFD9_MESCW similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 282.0
  • Bit_score: 463
  • Evalue 1.50e-127
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000256|HAMAP-Rule:MF_01850}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 288.0
  • Bit_score: 580
  • Evalue 1.20e-162
PP-loop domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 77.7
  • Coverage: 282.0
  • Bit_score: 463
  • Evalue 4.40e-128

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 876
ATGACCGCGGTGATGGAAGCCCCCGCCACGCCCGCCGATGACAGCGAAGTCGGCGCCCACCCGATCTATGCCAACGCGCCGCGCTCTGTTGAATTCAACAAGCTCCGGAAGCGCCTGATCCGCAATACGCGTGAGGCGCTGGAAAAGTTCGCCATGGTGAAGCCGGGCGAGAAGTGGCTGATCGCGCTTTCCGGCGGCAAGGACAGCTATGGGCTGCTTGCGCTGTTGCTGGATTTGAAGTGGCGCGGCCTGCTGCCGGTTGAATTGCTTGCCTGCAATCTCGACCAGGGTCAGCCCAACTTTCCCAAGCACATCCTGCCTCAATTCCTCGAAGGCCTCGGGATCGAGCATCGGATCGAATATCAGGACACCTATTCGATCGTGACCGACAAGCTGCCGCAGGGCGCCACCTATTGCTCGCTGTGCTCGCGCCTGCGCCGAGGCAACCTCTATCGCATCGCGCGCGAGGAAGGGTGTACCGCGCTGGTGCTGGGCCACCATCGTGACGACAGCCTCGAAACCTTCTTCATGAACATGTTCCACGGCGGCAAACTGGCGGCCATGCCGGCAAAGCTCGTCAATGACGAAGGCGATCTGGCCGTGCTGCGGCCTCTGATTTATTGCGCCGAGGAAGACCTGCAAAAATTCTCCGACTCAATGCAGTTCCCGATCATTCCCTGCGACCTCTGTGGCTCGCAGGAAGGCCTTGAGCGCAATGCGATGAAGGCCATGCTCACCGACATCGAAAAGCGGATGCCCGGTCGTAAGGACGTCATGATCCGTGCGCTAGGCAACATCAATCCCAGCCATATGCTTGATCCGAAGCTTTTCGATTTTGCTGGTCTTACCCTCAACCAAAAGGATGCAGACGCATGA
PROTEIN sequence
Length: 292
MTAVMEAPATPADDSEVGAHPIYANAPRSVEFNKLRKRLIRNTREALEKFAMVKPGEKWLIALSGGKDSYGLLALLLDLKWRGLLPVELLACNLDQGQPNFPKHILPQFLEGLGIEHRIEYQDTYSIVTDKLPQGATYCSLCSRLRRGNLYRIAREEGCTALVLGHHRDDSLETFFMNMFHGGKLAAMPAKLVNDEGDLAVLRPLIYCAEEDLQKFSDSMQFPIIPCDLCGSQEGLERNAMKAMLTDIEKRMPGRKDVMIRALGNINPSHMLDPKLFDFAGLTLNQKDADA*