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SCN18_25_8_15_R2_B_scaffold_2294

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2294_1
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..271
DNA (270bp) protein (90aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL30884.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCN18_25_8_15_R2_B_scaffold_2294_2
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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358..591
DNA (234bp) protein (78aa)
BolA family protein n=2 Tax=Rhodopseudomonas palustris RepID=B3Q7I2_RHOPT
ATP-binding protein {ECO:0000313|EMBL:KKB79852.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
BolA-like protein
SCN18_25_8_15_R2_B_scaffold_2294_3
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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598..921
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE72_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL30886.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2294_4
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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918..1298
DNA (381bp) protein (127aa)
HIT family hydrolase, diadenosine tetraphosphate hydrolase n=1 Tax=Rhizobium sp. CF142 RepID=J2L8T4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB82490.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
cell-cycle regulation histidine triad protein
SCN18_25_8_15_R2_B_scaffold_2294_5
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1295..1936
DNA (642bp) protein (214aa)
Putative HAD superfamily hydrolase n=1 Tax=Rhizobium sp. CF122 RepID=J2RBU8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL30887.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
HAD superfamily hydrolase protein
SCN18_25_8_15_R2_B_scaffold_2294_6
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1959..2498
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IER9_AZOC5
Uncharacterized protein {ECO:0000313|EMBL:KKB79854.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2294_7
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2607..2942
DNA (336bp) protein (112aa)
Glutaredoxin n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE73_PELHB
Glutaredoxin {ECO:0000256|PIRNR:PIRNR005894}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative monothiol glutaredoxin ycf64-like protein
SCN18_25_8_15_R2_B_scaffold_2294_8
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3104..4330
DNA (1227bp) protein (409aa)
MFS permease n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE74_PELHB
MFS transporter {ECO:0000313|EMBL:KKB10374.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
MFS permease
SCN18_25_8_15_R2_B_scaffold_2294_9
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4456..5712
DNA (1257bp) protein (419aa)
MFS family multidrug efflux protein, similarity to bicyclomycin resistance protein Bcr n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE75_PELHB
Major facilitator transporter {ECO:0000313|EMBL:KKB09857.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
MFS family multidrug efflux protein
SCN18_25_8_15_R2_B_scaffold_2294_10
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5768..6025)
DNA (258bp) protein (86aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Citreicella sp. 357 RepID=I1ASA6_9RHOB
clpP; ATP-dependent Clp protease proteolytic subunit
SCN18_25_8_15_R2_B_scaffold_2294_11
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6586..6933)
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00037B6BBA
Uncharacterized protein {ECO:0000313|EMBL:KFL30891.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2294_12
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6930..7244)
DNA (315bp) protein (105aa)
Transcriptional regulator n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FL99_9RHIZ
ArsR family transcriptional regulator {ECO:0000313|EMBL:KFL30892.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_2294_13
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7325..8137)
DNA (813bp) protein (271aa)
Inositol monophosphatase and related sulfite synthesis enzyme n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE76_PELHB
Inositol monophosphatase {ECO:0000313|EMBL:KFL30894.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
inositol monophosphatase
SCN18_25_8_15_R2_B_scaffold_2294_14
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8134..9009)
DNA (876bp) protein (292aa)
tRNA 2-thiocytidine biosynthesis protein TtcA n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TFD9_MESCW
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000256|HAMAP-Rule:MF_01850}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
PP-loop domain-containing protein
SCN18_25_8_15_R2_B_scaffold_2294_15
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9176..10573
DNA (1398bp) protein (466aa)
BacA, bacteroid development protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE78_PELHB
Microcin B17 transporter {ECO:0000313|EMBL:KKB79864.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
BacA, bacteroid development protein
SCN18_25_8_15_R2_B_scaffold_2294_16
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10687..11304)
DNA (618bp) protein (206aa)
30S ribosomal protein S4 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE79_PELHB
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
30S ribosomal protein S4
SCN18_25_8_15_R2_B_scaffold_2294_17
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11480..12718)
DNA (1239bp) protein (413aa)
Permease n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QJM0_9RHIZ
MFS transporter {ECO:0000313|EMBL:KFL30898.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
major facilitator superfamily protein
SCN18_25_8_15_R2_B_scaffold_2294_18
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12788..13600)
DNA (813bp) protein (271aa)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
tRNA:Cm32/Um32 methyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE81_PELHB
tRNA:Cm32/Um32 methyltransferase
SCN18_25_8_15_R2_B_scaffold_2294_19
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13658..14254)
DNA (597bp) protein (199aa)
Putative acetyltransferase n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D6E2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB79868.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
putative acetyltransferase
SCN18_25_8_15_R2_B_scaffold_2294_20
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14445..15008)
DNA (564bp) protein (188aa)
Acetyltransferase n=1 Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2Z6U8_9PSEU
Acetyltransferase {ECO:0000313|EMBL:KFL30901.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
acetyltransferase
SCN18_25_8_15_R2_B_scaffold_2294_21
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15189..15542
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE83_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB78602.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2294_22
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15539..15874
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE85_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL30902.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2294_23
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16008..17219
DNA (1212bp) protein (404aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Isocitrate dehydrogenase [NADP] n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE88_PELHB
isocitrate dehydrogenase
SCN18_25_8_15_R2_B_scaffold_2294_24
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17293..18981)
DNA (1689bp) protein (563aa)
UPI0003D01D75 related cluster n=1 Tax=unknown RepID=UPI0003D01D75
Uncharacterized protein {ECO:0000313|EMBL:KFL30904.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
von Willebrand factor type A
SCN18_25_8_15_R2_B_scaffold_2294_25
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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19151..19969
DNA (819bp) protein (273aa)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BTS2_9RHIZ
Glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:KFL30905.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
glycerophosphoryl diester phosphodiesterase
Displaying 25 items

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