ggKbase home page

SCN18_25_8_15_R2_B_scaffold_2294_18

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: comp(12788..13600)

Top 3 Functional Annotations

Value Algorithm Source
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 267.0
  • Bit_score: 508
  • Evalue 4.20e-141
tRNA:Cm32/Um32 methyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE81_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 261.0
  • Bit_score: 345
  • Evalue 4.30e-92
tRNA:Cm32/Um32 methyltransferase similarity KEGG
DB: KEGG
  • Identity: 65.1
  • Coverage: 261.0
  • Bit_score: 345
  • Evalue 1.20e-92

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 813
ATGGCAGGCACCGATACTTCGCTCCCGATCACGTTGACCCCAGGGCCGGCGATCATTCTTTGCGAACCCCAACTGGGTGAGAACATTGGCACGGCCGCGCGGGCTATGGCCAATTTCGGCCTGTGGGATCTGCGCCTGGTTCGCCCGCGCGACGGCTGGCCCAATGAAAAAGCCGTCGCGGCCGCCTCGCGCGCCGATCACGTGCTTGAACAGGTTCGGGTATTCGAAACGCTCGAAGAGGCGATTTCCGACCTGAAGCTCGTCTATGCGACGACGGCCCGCTCACGCGACATGCAGAAAGAAGTGCTTGGGCCTGAGGAAGCCTCCGTCAACATGGCTCAGCACATTGCAGCCGGGCAGGGCGCTGGCCTGCTCTTCGGGCGTGAGCGCTGGGGGCTGCTCAACGACGAAGTGGCCATGTCCGACGCGATCGTCACCTTGCCGGTGGAGCCAGCTTTTGCCTCGCTCAATATCGCCCAGGCCGTGCTGTTGATGGCCTATGAATGGCGCCGCCACGGCGGGCCGGGCAAGGTTCTGCCGTTCAGCGACGGTCTCGACGAGGCCGCGCCGCGCGAGGAACTGGTGGGGCTTTTCCAGCACCTGGAAGGCGTTCTGGATCAATCAGGCTTTTTCACCACGCCCGACAAGCGGCCGAGCATGGTCAACAATCTGCGCACGGCTTTGACGCGGGGCCGGTTCACCAGCCAGGAAATCCGGACCCTGCGCGGTGTTATTTCCTCGATCGACCGCCGGCACGAACGGCCGAATCCCAACCGGCAGAAGCCTACCAAGGACAAACCTGACGCAGAATGA
PROTEIN sequence
Length: 271
MAGTDTSLPITLTPGPAIILCEPQLGENIGTAARAMANFGLWDLRLVRPRDGWPNEKAVAAASRADHVLEQVRVFETLEEAISDLKLVYATTARSRDMQKEVLGPEEASVNMAQHIAAGQGAGLLFGRERWGLLNDEVAMSDAIVTLPVEPAFASLNIAQAVLLMAYEWRRHGGPGKVLPFSDGLDEAAPREELVGLFQHLEGVLDQSGFFTTPDKRPSMVNNLRTALTRGRFTSQEIRTLRGVISSIDRRHERPNPNRQKPTKDKPDAE*