ggKbase home page

SCN18_25_8_15_R2_B_scaffold_4869_3

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: comp(1790..2932)

Top 3 Functional Annotations

Value Algorithm Source
Phage integrase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F067_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 75.9
  • Coverage: 377.0
  • Bit_score: 558
  • Evalue 3.50e-156
Integrase {ECO:0000313|EMBL:KKB86164.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 380.0
  • Bit_score: 662
  • Evalue 2.40e-187
phage integrase similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 376.0
  • Bit_score: 553
  • Evalue 4.20e-155

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1143
ATGACCGATAATCTTGCATTATCGGACGTTCTGGTCATTATAGAGGGAATGGTCCAAAAACCCGACGAAATCGCTGAAAACGACGCCGGCAACGTCCCCCTGCCCTCTGCTGCAGATGCGGAACCCGTCGGCAATTCAGCCGTGTCGGTTCCGGCCGGCGAACTGGCCCATTTGCGGGCCCTCGCAGATCGCGCCCGGGACTATGTCGAGGCAGCCAGCTCGACAAATACCCGGCTGGCCTATGCCTCGGACTGGAAGCACTTTTCCAGCTGGTGTCGCCGGCAGCGGCTCGAAGTGCTGCCGCCAGATCCGCAGACGGTTGGCCTTTACATCACCGCCTGCGCGTCCGGGGAGGCGACGGGATCGGCCAACGCGGTCAGCACGATCGAACGGCGCCTCTCGGCTCTTTCGTGGAACTATGCGCAGCGCGGCCAGGCTCTGGACCGCAAGGATCGCCATATTGCGACAGTGATAGCTGGCATTCGCAACGTCCATGCGAAACCGCCCCGGCAAAAGGAGGCTGTCCTCCCCGAGGACCTCATAGCCATGCTCGAGACACTGGATCGCGGCACCCTTCGCGGTCTTCGCGACCGCGCAATGCTGCTCATAGGCTTCGCGGGCGGTCTTCGACGTTCTGAAATCGTCGGACTCGATGCCGGCGAAGGGCAGAGCGAGGACGGCCGTGGTTGGATCGAGATCCTAGAAAAAGGCATGGTCCTGAATATTCGTGGCAAAACTGGCTGGCGCGAGGTCGAAATCGGCCGCGGATCCTCTGATGCCACCTGCCCCGTTGTAGCCGTCGAAACCTGGCTCAAGCTGGCGCGGCTCGCGCATGGACCGCTGTTTCGCCGTGTGATTGGGCAGGGCAAGGCCGTAGGCGGCGATCGACTAAACGACAAGCAGGTCGCCCGCCTGGTCAAGACAGCGGCATTGGCGGCCGGCGTACGGGGCGACCTTTCGGAAGATGCGCGAGGTGCCTTGTTCGCGGGCCATTCTCTGCGGGCTGGTCTCGCCTCATCGGCCGAAGTCGACGAGCGCTATGTTCAAAAGCAGCTCGGACACGTTTCGGCCGAGATGACGCGGCGCTATCAACGCCGGCGGGATCGGTTCCGCGTGAACCTTACAAAGGCCGCAGGGCTGTAG
PROTEIN sequence
Length: 381
MTDNLALSDVLVIIEGMVQKPDEIAENDAGNVPLPSAADAEPVGNSAVSVPAGELAHLRALADRARDYVEAASSTNTRLAYASDWKHFSSWCRRQRLEVLPPDPQTVGLYITACASGEATGSANAVSTIERRLSALSWNYAQRGQALDRKDRHIATVIAGIRNVHAKPPRQKEAVLPEDLIAMLETLDRGTLRGLRDRAMLLIGFAGGLRRSEIVGLDAGEGQSEDGRGWIEILEKGMVLNIRGKTGWREVEIGRGSSDATCPVVAVETWLKLARLAHGPLFRRVIGQGKAVGGDRLNDKQVARLVKTAALAAGVRGDLSEDARGALFAGHSLRAGLASSAEVDERYVQKQLGHVSAEMTRRYQRRRDRFRVNLTKAAGL*