ggKbase home page

SCN18_25_8_15_R2_B_scaffold_4869

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_4869_1
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..348
DNA (348bp) protein (116aa)
Beta-lactamase domain-containing protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6D1_9RHIZ
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:EHH12621.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
metallo-beta-lactamase family protein
SCN18_25_8_15_R2_B_scaffold_4869_2
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

345..1670
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AE42_9PROT
MFS transporter {ECO:0000313|EMBL:KKB86163.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_4869_3
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1790..2932)
DNA (1143bp) protein (381aa)
Phage integrase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F067_9RHIZ
Integrase {ECO:0000313|EMBL:KKB86164.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
phage integrase
SCN18_25_8_15_R2_B_scaffold_4869_4
SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, Plasmid-like

Not on your lists

3009..3965
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037D8429
Uncharacterized protein {ECO:0000313|EMBL:KKC32296.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
Hypothetical protein
SCN18_25_8_15_R2_B_scaffold_4869_5
SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, Plasmid-like

Not on your lists

3977..4639
DNA (663bp) protein (221aa)
Putative transcriptional regulator n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11N28_MESSB
Transcriptional regulator {ECO:0000313|EMBL:KKC31384.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
condensin subunit ScpB
SCN18_25_8_15_R2_B_scaffold_4869_6
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4636..5955
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B9L8_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK59718.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_25_8_15_R2_B_scaffold_4869_7
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6065..6745)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B6F830
SCN18_25_8_15_R2_B_scaffold_4869_8
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6742..7851)
DNA (1110bp) protein (370aa)
hypothetical protein n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B4DB7E
Response regulator receiver domain protein, putative {ECO:0000313|EMBL:EEB86197.1}; TaxID=391589 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. GAI101.;"
response regulator receiver domain-containing protein
SCN18_25_8_15_R2_B_scaffold_4869_9
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7848..9119)
DNA (1272bp) protein (424aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=391589 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. GAI101.;"
hypothetical protein n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B72FF3
histidine kinase
SCN18_25_8_15_R2_B_scaffold_4869_10
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9324..10133)
DNA (810bp) protein (270aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=391589 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. GAI101.;"
hypothetical protein n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B72FF3
histidine kinase
SCN18_25_8_15_R2_B_scaffold_4869_11
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10163..10579)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B37B64
N-6 DNA Methylase family protein {ECO:0000313|EMBL:EEB84699.1}; TaxID=391589 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. GAI101.;"
N-6 DNA methylase
Displaying 11 items

View Taxonomy