ggKbase home page

SCN18_25_8_15_R2_B_scaffold_4886_1

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: 2..676

Top 3 Functional Annotations

Value Algorithm Source
Putative Pilus assembly protein cpaC n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFS3_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 224.0
  • Bit_score: 238
  • Evalue 6.20e-60
Uncharacterized protein {ECO:0000313|EMBL:KKB08182.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.1
  • Coverage: 225.0
  • Bit_score: 305
  • Evalue 4.40e-80
putative Pilus assembly protein cpaC similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 224.0
  • Bit_score: 238
  • Evalue 1.80e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
GCCGGCACGGGCGGCTTCCCGATCGGCAACGTGCAGATAGACGCTGCCATCAAGGCGCTCGAACATCGGGAAGCCTTGCGCCTCCTGGCGCAGCCGACGCTGACGGCCCTCTCGGGCGAATCTGCGAACTTCCTCGTTGGTGGTGAGGTTCGCTACCAGAACGGCACCGATGATCGCGGTAACCCCAAATTTGATCTACGCGAATATGGCGTGAAGCTTAACTTCACACCTGTCGTGAAGACCGGCGGCCTCATTTCCATCAAGGTGGAAACCGAGGTGTCGGAGCCAGACGTTGCTGCTTTGCTCAAGACGCGCAAGGCAGCCACATCAGTGGAGCTGCCGGCCGGTGCTACCCTGGCCATCGGTGGTCTGCTTGACGAACGTGTCAGCCGCGTGGCGTCGCAACTGCCGGGGCTGGGCAATATCCCGATCCTCGGGGCATTGTTCCGGTCGAACCAGTACCAGACCCGGCAGACCGAGCTGGTCATCCTGGTCACGCCCTATCTAGTCAATCCGAGCCCGGCCAACACCATTGCTGTGCCGACCGATTTCTCGACCCCGGCCAGCGACGCTGAGGCGATTTTCCTCGGCAAGCTCGAAAATCAATATGGCGTGGCTGGCAGCGGCGGCATGCGTGGCGGGTTCAGCGGCTCGGTCGGCTTTGTGCTCGACTGA
PROTEIN sequence
Length: 225
AGTGGFPIGNVQIDAAIKALEHREALRLLAQPTLTALSGESANFLVGGEVRYQNGTDDRGNPKFDLREYGVKLNFTPVVKTGGLISIKVETEVSEPDVAALLKTRKAATSVELPAGATLAIGGLLDERVSRVASQLPGLGNIPILGALFRSNQYQTRQTELVILVTPYLVNPSPANTIAVPTDFSTPASDAEAIFLGKLENQYGVAGSGGMRGGFSGSVGFVLD*