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SCN18_25_8_15_R2_B_scaffold_4886_2

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: 703..1980

Top 3 Functional Annotations

Value Algorithm Source
Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFS4_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 66.1
  • Coverage: 422.0
  • Bit_score: 590
  • Evalue 9.30e-166
CtpF protein {ECO:0000313|EMBL:KFL30996.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 425.0
  • Bit_score: 786
  • Evalue 1.20e-224
type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 422.0
  • Bit_score: 590
  • Evalue 2.60e-166

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1278
ATGAAGAGTTTCCTGACCTCGGACGAACCGGAGAAGCAGGAAGAGGCAGCGGCGGAAATTTCCCCCGGCGCACGTCTTGTGCCACGCATCACCATTCAGGCCTTCTGCGAGCATTCCCAGACGGCCCAGCTGGTCGAAAGCGCCGTTCATGACCGCCGTATGTCGAAGGTTGCCCTGACCACGCACAATGGCGGCATCGATGGTGCGGTCGAGACATACAAGACCAATCCGACGCCCAACCTGATCATTGTTGAAACGACGCAGTCGCCCGAGGAAATTCCGGCCGCGCTCGGGCGCCTCGCCGAGGTCTGCGACGCGACGACGCGCGTCATCGTTCTTGGCCACGTCAACGACGTGCTGCTCTACCGCGAACTCATTCGCTCGGGCATTTCCGAATATATCGTGTTGCCGGCAACGGCGCAGTTGATCGTCACCGCCATTACCGAGCTCTTCGCCGGCGAGGGCGCTGCCCCAATCGGCCGGACCATCGGTTTTGTCTCGGCCAAGGGCGGGGCAGGCGGCTCGACTGTGGCGCACAATGTCGCCTGGGCTATCGCCACCGTGCTCCGGCAGGATTGCCTTATCCTCGATATGGACATGGCTTTCGGCACGGCCGGCCTCAACTTCAACCAGGACCCGCCCCACGGCGTTGCTGACGCGCTTCTCGCCAATCAAAAGGTCGACCAGACCATGCTCGACCGCCTGATGAGCAAGGCGGCCAGCCACATCAACCTCCTTACGGCCCCCGCGACGTTGGACCGAACCTGGGATTTTGAGGAGCGCGAGTTCGAGCAGATTGTCGAAATCTGCCAGCGTTCCGTGCCGGTGATCATTCTCGATATTCCCCATGCCTGGAATGCCTGGGTGCGCCACACGCTCTCGACCATCGATGAAGTGGTGATCGTCGCCGAGCCGGACCTTGCCAATCTGCGTAATGCCAAGAACCTGGCAGACACGATCAAGGCACTGCGCCCGACCGAAAAGGCGCCGAGCCTTGTCATCAACAAGCAGGGCGTTCCCCGGCGTCCCGAGATCAGCGCTTCGGAATTCGCCGCCTCGGTCGAATGCGGCCTTATCGGCCAGATCGGCTTCGATTCCGCGCTTTTCGGCACGGCCGCGAACAACGGGCAGATGATCGCCGAGGTGTCGGCGAACAACAAGGTCAACGAGGTCTACCGCAATGTCGGCATGCAGGTGACCGGGCGTCAGCCCACCCATGGCACCGGCAAGTCGGCGGGGCTGATGAAGTTGCCGTCCTTCCTCAAGAAGCGGGCCTGA
PROTEIN sequence
Length: 426
MKSFLTSDEPEKQEEAAAEISPGARLVPRITIQAFCEHSQTAQLVESAVHDRRMSKVALTTHNGGIDGAVETYKTNPTPNLIIVETTQSPEEIPAALGRLAEVCDATTRVIVLGHVNDVLLYRELIRSGISEYIVLPATAQLIVTAITELFAGEGAAPIGRTIGFVSAKGGAGGSTVAHNVAWAIATVLRQDCLILDMDMAFGTAGLNFNQDPPHGVADALLANQKVDQTMLDRLMSKAASHINLLTAPATLDRTWDFEEREFEQIVEICQRSVPVIILDIPHAWNAWVRHTLSTIDEVVIVAEPDLANLRNAKNLADTIKALRPTEKAPSLVINKQGVPRRPEISASEFAASVECGLIGQIGFDSALFGTAANNGQMIAEVSANNKVNEVYRNVGMQVTGRQPTHGTGKSAGLMKLPSFLKKRA*