ggKbase home page

SCN18_25_8_15_R2_B_scaffold_9109_5

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: 2340..3272

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 310.0
  • Bit_score: 571
  • Evalue 6.00e-160
tRNA-dihydrouridine synthase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8Z8_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 64.2
  • Coverage: 310.0
  • Bit_score: 399
  • Evalue 1.70e-108
tRNA dihydrouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 64.2
  • Coverage: 310.0
  • Bit_score: 399
  • Evalue 4.80e-109

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Devosia_62_26 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 933
ATGGCTGGAATCACCGATCGCCCTTTCCGTGAAATCGCGGAACGCTATGGCGCGGGTCTTGTCGTCTCCGAAATGATAGCGAGCGCAGCACTGGGCACGGGCCACAGTGACATGGTGCGCAAGCTGCGTCGAGCGGGCGACCTGCCGCATATGGTGCAATTGGCCGGGTGTGAGCCAGGTTGGATGGCTGAGGGCGCCAGGATCGCTGGCGCCGCTGGCGCCGATATCGTCGATATCAATTTTGGATGTCCCGCCAAGCGCGTGACCAACGGTTATGCCGGCTCCGCCCTGATGCGGGTGCCCGATCAGGCGCTTGCGATCGTCGAAGCTGTTGCTGGTGCAACGGACCTGCCGGTTACGGTCAAGATGCGCCTTGGCTGGGACGATGACAGCCTCAACGCCCCCCAGATTGCCAAGATGGCGGTCGATGCTGGCGCACGGATGATCACGGTACATGGCCGCACACGGCAACAGTTCTACAAGGGCACAGCCCGCTGGGAACTGGTGCGCGCGGTCGTCGAGGCCGTTTCGGTGCCGGTGGTCGTCAACGGCGACATCATCGATGCCGAGACCGCGGCATCAGCCCTGGAGCAATCCGGAGCCGCCGCAGTCATGCTTGGGCGTGGAGCGCAAGGCCGCCCATGGCGCGTAGGGCAGATCGGCGCCGTCCTGGCCGGCGAAACGCCAAAGGATGCCCCCAAGGACGCTGAGCTGATTGCGCTCATCCAGACGCACTACGAAGAAATGCTGGTCGAGTACGGCACCGAAGTTGGGTCGCGCGCCGCGCGCAAGCACCTCGACTGGTACGCCGAGGCTGCCAACCTCGATCTCGACAAGCCGACCCGCAACTCCCTTCTCAACAATGACCAGCCGGCCGAGGTCATTGACCTCATTGGCCGAGTATTTTCGCCTGAATGGAGAGTGGCTGCATGA
PROTEIN sequence
Length: 311
MAGITDRPFREIAERYGAGLVVSEMIASAALGTGHSDMVRKLRRAGDLPHMVQLAGCEPGWMAEGARIAGAAGADIVDINFGCPAKRVTNGYAGSALMRVPDQALAIVEAVAGATDLPVTVKMRLGWDDDSLNAPQIAKMAVDAGARMITVHGRTRQQFYKGTARWELVRAVVEAVSVPVVVNGDIIDAETAASALEQSGAAAVMLGRGAQGRPWRVGQIGAVLAGETPKDAPKDAELIALIQTHYEEMLVEYGTEVGSRAARKHLDWYAEAANLDLDKPTRNSLLNNDQPAEVIDLIGRVFSPEWRVAA*