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SCN18_25_8_15_R2_B_scaffold_9109

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_9109_1
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..370
DNA (369bp) protein (123aa)
Putative oligoketide cyclase/dehydratase or lipid transport protein YfjG n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8Z5_PELHB
Putative oligoketide cyclase/dehydratase or lipid transport protein YfjG {ECO:0000313|EMBL:KFC72404.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
putative oligoketide cyclase/dehydratase or lipid transport protein YfjG
SCN18_25_8_15_R2_B_scaffold_9109_2
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(374..877)
DNA (504bp) protein (168aa)
C-terminal domain of CinA type S, protein Implicated in DNA repair function with RecA and MutS n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8Z6_PELHB
Damage-inducible protein CinA {ECO:0000313|EMBL:KFL32441.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
C-terminal domain of CinA type S, protein Implicated in DNA repair function with RecA and MutS
SCN18_25_8_15_R2_B_scaffold_9109_3
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(878..1165)
DNA (288bp) protein (96aa)
Bifunctional enzyme IspD/IspF n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2KP07_9PROT
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
SCN18_25_8_15_R2_B_scaffold_9109_4
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1129..2097)
DNA (969bp) protein (323aa)
Bifunctional enzyme IspD/IspF n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8Z7_PELHB
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
SCN18_25_8_15_R2_B_scaffold_9109_5
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2340..3272
DNA (933bp) protein (311aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
tRNA-dihydrouridine synthase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8Z8_PELHB
tRNA dihydrouridine synthase B
SCN18_25_8_15_R2_B_scaffold_9109_6
SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, Actinobacteria, Actinobacteria, Bacteria

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3269..4480
DNA (1212bp) protein (404aa)
hypothetical protein n=1 Tax=Candidatus Microthrix parvicella RepID=UPI0003742956
Uncharacterized protein {ECO:0000313|EMBL:CCM61997.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
putative polysaccharide biosynthesis protein
Displaying 6 items

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