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SCN18_25_8_15_R2_B_scaffold_311

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Displaying items 1-30 of 141 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_311_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..897
DNA (897bp) protein (299aa)
ATP-dependent protease n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030971C2
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ATP-dependent Clp protease ATP-binding subunit ClpX
SCN18_25_8_15_R2_B_scaffold_311_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1256..3682
DNA (2427bp) protein (809aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
peptidase n=1 Tax=Methylobacterium sp. MB200 RepID=UPI0003799FC9
ATP-dependent protease La
SCN18_25_8_15_R2_B_scaffold_311_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3824..4036
DNA (213bp) protein (71aa)
SCN18_25_8_15_R2_B_scaffold_311_trna_3
unknown

Not on your lists

comp(4106..4178)
DNA (73bp)
transferRNA Val
SCN18_25_8_15_R2_B_scaffold_311_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4292..4750
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J2V6H4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AKI01681.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_311_trna_1
unknown

Not on your lists

4866..4939
DNA (74bp)
transferRNA Asp
SCN18_25_8_15_R2_B_scaffold_311_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5013..6272)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7ILD0_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS68823.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCN18_25_8_15_R2_B_scaffold_311_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6269..6562)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7ILD1_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS68824.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCN18_25_8_15_R2_B_scaffold_311_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6565..6741)
DNA (177bp) protein (59aa)
SCN18_25_8_15_R2_B_scaffold_311_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6738..7109)
DNA (372bp) protein (124aa)
HNH endonuclease family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QW01_BREDI
Restriction endonuclease {ECO:0000313|EMBL:KKC39553.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_311_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7106..7543)
DNA (438bp) protein (146aa)
SCN18_25_8_15_R2_B_scaffold_311_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7547..8617)
DNA (1071bp) protein (357aa)
RecT family protein n=2 Tax=unclassified dsDNA viruses RepID=M4QSN3_9VIRU
RecT family protein {ECO:0000313|EMBL:AGH31344.1}; TaxID=754070 species="Viruses; dsDNA viruses, no RNA stage; unclassified dsDNA viruses.;" source="Tetraselmis viridis virus S20.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_311_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8826..9767)
DNA (942bp) protein (314aa)
SCN18_25_8_15_R2_B_scaffold_311_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9764..9922)
DNA (159bp) protein (53aa)
SCN18_25_8_15_R2_B_scaffold_311_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9922..10113)
DNA (192bp) protein (64aa)
SCN18_25_8_15_R2_B_scaffold_311_14
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10103..10414)
DNA (312bp) protein (104aa)
SCN18_25_8_15_R2_B_scaffold_311_15
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10411..10548)
DNA (138bp) protein (46aa)
SCN18_25_8_15_R2_B_scaffold_311_16
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10545..10787)
DNA (243bp) protein (81aa)
SCN18_25_8_15_R2_B_scaffold_311_17
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11280..11519
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Sinorhizobium meliloti (strain BL225C) RepID=F6BT06_SINMB
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDN52510.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
SCN18_25_8_15_R2_B_scaffold_311_18
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11516..11821
DNA (306bp) protein (102aa)
SCN18_25_8_15_R2_B_scaffold_311_19
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11854..13080)
DNA (1227bp) protein (409aa)
hypothetical protein n=1 Tax=Vibrio cholerae RepID=UPI000376C42F
Uncharacterized protein {ECO:0000313|EMBL:EII46805.1}; TaxID=869688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2.3916.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_311_20
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13179..13952)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI00037618C6
Uncharacterized protein {ECO:0000313|EMBL:KFC73220.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
helix-turn-helix domain-containing protein
SCN18_25_8_15_R2_B_scaffold_311_21
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14028..14285
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Sinorhizobium medicae RepID=UPI00037FFC95
Uncharacterized protein {ECO:0000313|EMBL:KFG68678.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_311_22
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14285..14401
DNA (117bp) protein (39aa)
SCN18_25_8_15_R2_B_scaffold_311_23
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14572..14916
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IRJ5_METNO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL58735.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCN18_25_8_15_R2_B_scaffold_311_24
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14935..15084
DNA (150bp) protein (50aa)
SCN18_25_8_15_R2_B_scaffold_311_25
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15081..15530
DNA (450bp) protein (150aa)
SCN18_25_8_15_R2_B_scaffold_311_26
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15587..16249
DNA (663bp) protein (221aa)
SCN18_25_8_15_R2_B_scaffold_311_27
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16249..16812
DNA (564bp) protein (188aa)
SCN18_25_8_15_R2_B_scaffold_311_28
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16812..17144
DNA (333bp) protein (111aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=690417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sphaerophysae.;"
LexA transcriptional regulator (EC:3.4.21.88)
LexA repressor n=1 Tax=Citreicella sp. SE45 RepID=D0D297_9RHOB
Displaying items 1-30 of 141 in total

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