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SCN18_25_8_15_R2_B_scaffold_417

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Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_417_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(925..1791)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DJX2_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL11182.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCN18_25_8_15_R2_B_scaffold_417_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2007..3848
DNA (1842bp) protein (614aa)
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase {ECO:0000255|HAMAP-Rule:MF_00012}; Short=DAD {ECO:0000255|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000255|HAMAP-Rule:MF_00012};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
dihydroxy-acid dehydratase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00036A7E64
SCN18_25_8_15_R2_B_scaffold_417_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4033..5133
DNA (1101bp) protein (367aa)
UPI0003CE1FFE related cluster n=1 Tax=unknown RepID=UPI0003CE1FFE
Membrane protein {ECO:0000313|EMBL:ESY66592.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
HPP family protein
SCN18_25_8_15_R2_B_scaffold_417_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5202..6137
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000308CD50
Bradyrhizobium elkanii strain UASWS1015 Contig175, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49004.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_417_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6196..6696)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EB04_BRASB
Uncharacterized protein {ECO:0000313|EMBL:KFC61574.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_417_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6931..7374
DNA (444bp) protein (148aa)
Transcriptional regulator, AsnC family n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EBE8_BRASB
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ABQ33492.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCN18_25_8_15_R2_B_scaffold_417_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7554..8681
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EBF0_BRASB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ33494.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCN18_25_8_15_R2_B_scaffold_417_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8715..9329)
DNA (615bp) protein (205aa)
Haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTY0_9RHIZ
Haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:KFC72938.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
haloacid dehalogenase
SCN18_25_8_15_R2_B_scaffold_417_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9428..10336
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI000381E51A
Flavocytochrome YedZ {ECO:0000313|EMBL:KFC72939.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Ferric reductase domain-containing protein
SCN18_25_8_15_R2_B_scaffold_417_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10417..12147
DNA (1731bp) protein (577aa)
Arabinose efflux permease family protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YS10_9RHIZ
MFS permease {ECO:0000313|EMBL:KFC72940.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_417_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12293..13090)
DNA (798bp) protein (266aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Undecaprenyl-diphosphatase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTX0_9RHIZ
putative undecaprenol kinase
SCN18_25_8_15_R2_B_scaffold_417_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13348..14040
DNA (693bp) protein (231aa)
Glutathione S-transferase domain n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UFD3_METS4
Glutathione S-transferase domain protein {ECO:0000313|EMBL:KFC66943.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
glutathione S-transferase domain-containing protein
SCN18_25_8_15_R2_B_scaffold_417_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14037..15176
DNA (1140bp) protein (380aa)
Epoxyqueuosine reductase {ECO:0000313|EMBL:KFC66944.1}; EC=1.1.-.- {ECO:0000313|EMBL:KFC66944.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Epoxyqueuosine reductase n=1 Tax=Methylobacterium extorquens (strain CM4 / NCIMB 13688) RepID=B7KNR3_METC4
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_417_14
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15173..16039
DNA (867bp) protein (289aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4TIZ4_9RHIZ
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:KFC66945.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
NAD-dependent epimerase/dehydratase
SCN18_25_8_15_R2_B_scaffold_417_15
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16148..17104)
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 88A RepID=UPI00035FAA48
Uncharacterized protein {ECO:0000313|EMBL:KFC66946.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_417_16
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17201..19294)
DNA (2094bp) protein (698aa)
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:KFC66947.1}; EC=2.7.3.- {ECO:0000313|EMBL:KFC66947.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D385A0
SCN18_25_8_15_R2_B_scaffold_417_17
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19388..20926)
DNA (1539bp) protein (513aa)
ATPase AAA n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030839E3
Mg chelatase-related protein {ECO:0000313|EMBL:KFC66948.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Mg chelatase subunit ChlI
SCN18_25_8_15_R2_B_scaffold_417_18
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21041..21697)
DNA (657bp) protein (219aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
methionine sulfoxide reductase A (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Microvirga sp. WSM3557 RepID=I4YXJ2_9RHIZ
SCN18_25_8_15_R2_B_scaffold_417_19
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21781..22101)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F22340
Uncharacterized protein {ECO:0000313|EMBL:KFC66951.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
protein of unassigned function
SCN18_25_8_15_R2_B_scaffold_417_trna_1
unknown

Not on your lists

22291..22377
DNA (87bp)
transferRNA Ser
SCN18_25_8_15_R2_B_scaffold_417_20
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22979..23581)
DNA (603bp) protein (201aa)
Isochorismatase family protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4J6_POLGS
isochorismatase
Isochorismatase family protein {ECO:0000313|EMBL:ADZ72248.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCN18_25_8_15_R2_B_scaffold_417_21
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23626..24528)
DNA (903bp) protein (301aa)
Isocitrate lyase family protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4J9_POLGS
Isocitrate lyase
Isocitrate lyase family protein {ECO:0000313|EMBL:ADZ72250.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCN18_25_8_15_R2_B_scaffold_417_22
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24521..25039)
DNA (519bp) protein (173aa)
3-isopropylmalate dehydratase small subunit n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QS49_BREDI
3-isopropylmalate dehydratase small subunit
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
SCN18_25_8_15_R2_B_scaffold_417_23
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25042..26316)
DNA (1275bp) protein (425aa)
3-isopropylmalate dehydratase large subunit n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QR79_BREDI
3-isopropylmalate dehydratase large subunit {ECO:0000313|EMBL:EKY30533.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
3-isopropylmalate dehydratase large subunit
SCN18_25_8_15_R2_B_scaffold_417_24
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26320..27159)
DNA (840bp) protein (280aa)
Transcriptional regulator, GntR family n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C361_HYPNA
GntR family transcriptional regulator
Regulatory protein GntR, HTH:UbiC transcription regulator-associated {ECO:0000313|EMBL:ADZ72259.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCN18_25_8_15_R2_B_scaffold_417_25
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27235..28032
DNA (798bp) protein (266aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component n=1 Tax=Pseudomonas fluorescens BBc6R8 RepID=V7E8T1_PSEFL
Taurine-transporting AtPase {ECO:0000313|EMBL:EJF70258.1}; TaxID=1197727 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Ag1.;"
taurine-transporting AtPase
SCN18_25_8_15_R2_B_scaffold_417_26
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28029..28793
DNA (765bp) protein (255aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Pseudomonas sp. GM67 RepID=J2TX71_9PSED
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:AJE49148.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
SCN18_25_8_15_R2_B_scaffold_417_27
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28822..29871
DNA (1050bp) protein (350aa)
nitrate ABC transporter substrate-binding protein n=1 Tax=Pseudomonas fluorescens RepID=UPI0002E3C014
Uncharacterized protein {ECO:0000313|EMBL:ETK16469.1}; TaxID=1284392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. FH1.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_417_28
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30507..31439
DNA (933bp) protein (311aa)
Putative Acetamidase/Formamidase family protein {ECO:0000313|EMBL:KFC69621.1}; EC=3.5.1.- {ECO:0000313|EMBL:KFC69621.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Putative acetamidase/formamidase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YYF6_9RHIZ
Acetamidase/Formamidase
SCN18_25_8_15_R2_B_scaffold_417_29
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31474..32745
DNA (1272bp) protein (424aa)
Peptidase dimerization domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZX24_9PROT
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase {ECO:0000313|EMBL:KFC75984.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
peptidase
Displaying items 1-30 of 71 in total

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