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SCN18_25_8_15_R2_B_scaffold_5625

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_5625_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..107)
DNA (105bp) protein (35aa)
30S ribosomal protein S17 n=1 Tax=Methylosinus sp. LW4 RepID=UPI000366B58A
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
rpsQ; 30S ribosomal protein S17
SCN18_25_8_15_R2_B_scaffold_5625_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(118..330)
DNA (213bp) protein (71aa)
50S ribosomal protein L29 n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E524F2
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
50S ribosomal protein L29
SCN18_25_8_15_R2_B_scaffold_5625_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(342..755)
DNA (414bp) protein (138aa)
50S ribosomal protein L16 n=1 Tax=Microvirga sp. WSM3557 RepID=I4YWB4_9RHIZ
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
50S ribosomal protein L16
SCN18_25_8_15_R2_B_scaffold_5625_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(774..1499)
DNA (726bp) protein (242aa)
30S ribosomal protein S3 n=1 Tax=Methylobacterium RepID=UPI00038132F0
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
30S ribosomal protein S3
SCN18_25_8_15_R2_B_scaffold_5625_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1510..1893)
DNA (384bp) protein (128aa)
50S ribosomal protein L22 n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CC47_9RHIZ
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
rplV; 50S ribosomal protein L22
SCN18_25_8_15_R2_B_scaffold_5625_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1897..2175)
DNA (279bp) protein (93aa)
30S ribosomal protein S19 n=1 Tax=Microvirga sp. WSM3557 RepID=I4YWB1_9RHIZ
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
rpsS; 30S ribosomal protein S19
SCN18_25_8_15_R2_B_scaffold_5625_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2184..3026)
DNA (843bp) protein (281aa)
50S ribosomal protein L2 n=1 Tax=Microvirga sp. WSM3557 RepID=I4YWB0_9RHIZ
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
rplB; 50S ribosomal protein L2
SCN18_25_8_15_R2_B_scaffold_5625_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3037..3348)
DNA (312bp) protein (104aa)
50S ribosomal protein L23 n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031FE879
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
rplW; 50S ribosomal protein L23
SCN18_25_8_15_R2_B_scaffold_5625_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3345..3965)
DNA (621bp) protein (207aa)
50S ribosomal protein L4 n=1 Tax=Microvirga sp. WSM3557 RepID=I4YWA8_9RHIZ
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
rplD; 50S ribosomal protein L4
SCN18_25_8_15_R2_B_scaffold_5625_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3965..4693)
DNA (729bp) protein (243aa)
50S ribosomal protein L3 n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=RL3_METS4
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
rplC; 50S ribosomal protein L3
SCN18_25_8_15_R2_B_scaffold_5625_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4818..5126)
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A952_STAND
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
30S ribosomal protein S10
SCN18_25_8_15_R2_B_scaffold_5625_12
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5197..5346)
DNA (150bp) protein (50aa)
Elongation factor Tu n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3HZS2_RHOVT
translation elongation factor Tu
Tax=RBG_16_Alphaproteobacteria_64_48_curated
Displaying 12 items

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