ggKbase home page

SCN18_25_8_15_R2_B_scaffold_1875

Search features with annotation key words

Displaying 12 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1875_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..722)
DNA (720bp) protein (240aa)
Substrate-binding protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G1E7_9BRAD
Substrate-binding protein {ECO:0000313|EMBL:KFC75990.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
substrate-binding protein
SCN18_25_8_15_R2_B_scaffold_1875_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1199..1999
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YXP0_9RHIZ
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:KFC70773.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
short chain dehydrogenase
SCN18_25_8_15_R2_B_scaffold_1875_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2012..3061
DNA (1050bp) protein (350aa)
idhA; inositol 2-dehydrogenase (EC:1.1.1.18)
Putative dehydrogenase n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YGZ3_9BRAD
Putative dehydrogenase {ECO:0000313|EMBL:EHR02512.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
SCN18_25_8_15_R2_B_scaffold_1875_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3061..3843
DNA (783bp) protein (261aa)
UPI0003CF5368 related cluster n=1 Tax=unknown RepID=UPI0003CF5368
Inositol-phosphate phosphatase {ECO:0000313|EMBL:KFC70775.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
inositol monophosphatase
SCN18_25_8_15_R2_B_scaffold_1875_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3935..4972
DNA (1038bp) protein (346aa)
ABC-type Fe3+ transport system, periplasmic component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YXK4_9RHIZ
Putative 2-aminoethylphosphonate ABC transporter, periplasmic binding protein {ECO:0000313|EMBL:KFC70776.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
extracellular solute-binding protein
SCN18_25_8_15_R2_B_scaffold_1875_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5205..7412
DNA (2208bp) protein (736aa)
ABC-type Fe3+ transport system, permease component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YXK5_9RHIZ
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:KFC70777.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
iron ABC transporter permease
SCN18_25_8_15_R2_B_scaffold_1875_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7427..8494
DNA (1068bp) protein (356aa)
Fe(3+) ions import ATP-binding protein FbpC {ECO:0000256|HAMAP-Rule:MF_01706}; EC=3.6.3.30 {ECO:0000256|HAMAP-Rule:MF_01706};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
UPI0003CFA460 related cluster n=1 Tax=unknown RepID=UPI0003CFA460
putative ATP-binding component of ABC transporter
SCN18_25_8_15_R2_B_scaffold_1875_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8655..10382
DNA (1728bp) protein (576aa)
Na/Pi cotransporter II-related protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TK00_9PROT
Na/Pi-cotransporter {ECO:0000313|EMBL:KFC64149.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Na/Pi cotransporter II-like protein
SCN18_25_8_15_R2_B_scaffold_1875_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10392..10712)
DNA (321bp) protein (107aa)
UPF0060 membrane protein Nham_2004 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Y2004_NITHX
UPF0060 membrane protein FG93_03023 {ECO:0000256|HAMAP-Rule:MF_00010}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1875_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10902..12131
DNA (1230bp) protein (410aa)
HI0933 family protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IH78_METNO
Family flavoprotein {ECO:0000313|EMBL:KFC70007.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1875_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12209..15646)
DNA (3438bp) protein (1146aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000372D23F
Restriction endonuclease subunit M {ECO:0000313|EMBL:KFG68420.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1875_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15788..17134
DNA (1347bp) protein (449aa)
excinuclease ABC subunit B n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000318A431
excinuclease ABC subunit B
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
Displaying 12 items

View Taxonomy