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SCN18_25_8_15_R2_B_scaffold_486_1

Organism: SCN18_25_8_15_R2_B_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_66_16

near complete RP 49 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 1..1104

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E332BF similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 367.0
  • Bit_score: 667
  • Evalue 5.20e-189
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 367.0
  • Bit_score: 698
  • Evalue 5.00e-198
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 91.8
  • Coverage: 366.0
  • Bit_score: 652
  • Evalue 3.70e-185

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1104
AAGCTCAAGGACGACATCATCACCGCGGTGAAGTCGCTCTCGCTCAACAACAACCGCATCGAGGCGCTGGTCGAGCAGCTCTACGACATCAACAAGCGCCTGATCGGCCATGAGACGCGCCTGCTGCGCCTCGCCGAGAGCTATGGCGTGGCGCGCGACGACTTCCTCAAGCAGCATGTCGGCGGCGAGCTCGACCCGAAATGGGTCCTGCGCGTCTCCAAGCTCGGCTCGCGCGGCTGGAAGGAGTTCGTCGCGGCGGAACTTGAGCGGATCAAGCAGCTGCGTGAGGAGGTGCATACGCTCGCCTCCGAAACCGGCCTGGAGATCCAGGAATTCCGCAAGATCGTGTTGATGGTCCAGAAGGGCGAGCGCGAGGCCCGGCAGGCCAAGAAGGAGATGATCGAGGCGAACCTGCGCCTCGTGATCTCGATCGCCAAGAAGTATACGAACCGCGGCCTGCAGTTCCTCGACCTGATCCAGGAAGGCAATATCGGCCTGATGAAGGCGGTCGACAAGTTCGAGTACCGTCGCGGCTACAAGTTCTCGACCTACGCGACCTGGTGGATCCGGCAGGCGATCACCCGCTCGATCGCCGACCAGGCCCGCACGATCCGCATTCCGGTCCACATGATCGAGACGATCAACAAGATCGTGCGGACCTCGCGCCAGATGCTGCACGAGATCGGCCGCGAGCCGACTCCGGAGGAACTGGCCGAGAAGCTGGCCATGCCGCTGGAGAAGGTGCGCAAGGTCCTGAAGATCGCCAAGGAGCCGATCTCGCTGGAAACCCCGATCGGCGACGAGGAGGATTCGCATCTCGGCGACTTCATCGAGGACAAGAACGCGATCCTGCCGATCGACGCCGCGATCCAGTCGAACCTGCGTGAGACGACGACCCGCGTGCTGGCCTCGCTCACGCCGCGCGAGGAGCGTGTGCTGCGCATGCGCTTCGGCATCGGCATGAACACCGACCACACCCTCGAAGAGGTCGGCCAGCAGTTCAGCGTCACCCGCGAGCGCATCCGCCAGATCGAGGCGAAGGCGCTGCGCAAGCTGAAGCACCCGAGCCGCTCGCGGAAGCTCAGGAGCTTCCTTGATAACTGA
PROTEIN sequence
Length: 368
KLKDDIITAVKSLSLNNNRIEALVEQLYDINKRLIGHETRLLRLAESYGVARDDFLKQHVGGELDPKWVLRVSKLGSRGWKEFVAAELERIKQLREEVHTLASETGLEIQEFRKIVLMVQKGEREARQAKKEMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREPTPEELAEKLAMPLEKVRKVLKIAKEPISLETPIGDEEDSHLGDFIEDKNAILPIDAAIQSNLRETTTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDN*