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SCN18_25_8_15_R2_B_scaffold_486

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Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_486_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1104
DNA (1104bp) protein (368aa)
RNA polymerase sigma factor RpoD n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E332BF
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
RNA polymerase sigma factor RpoD
SCN18_25_8_15_R2_B_scaffold_486_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1311..1871
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035F2447
SCN18_25_8_15_R2_B_scaffold_486_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1960..2571
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000372FE55
Lysine transporter LysE {ECO:0000313|EMBL:KGM32374.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
lysine exporter protein LysE/YggA
SCN18_25_8_15_R2_B_scaffold_486_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2571..2996
DNA (426bp) protein (142aa)
Secondary thiamine-phosphate synthase enzyme n=1 Tax=Rhizobium sp. CF122 RepID=J3BSM6_9RHIZ
Secondary thiamine-phosphate synthase enzyme {ECO:0000313|EMBL:EJL57356.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_486_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3001..3252)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P138_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS35151.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_486_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3489..3776
DNA (288bp) protein (96aa)
UPI0003CEDEB9 related cluster n=1 Tax=unknown RepID=UPI0003CEDEB9
Uncharacterized protein {ECO:0000313|EMBL:KFC73914.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_486_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3905..5140
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D3647B
Putative oxalate/formate antiporter {ECO:0000313|EMBL:KFC73910.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
major facilitator superfamily protein
SCN18_25_8_15_R2_B_scaffold_486_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5125..5562)
DNA (438bp) protein (146aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N6A8_9RHIZ
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:KFC73909.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_486_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5697..6104
DNA (408bp) protein (136aa)
Acyl-CoA thioester hydrolase {ECO:0000313|EMBL:KFC73908.1}; EC=3.1.2.- {ECO:0000313|EMBL:KFC73908.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
acyl-CoA hydrolase n=1 Tax=Methylobacterium sp. 77 RepID=UPI000375A46F
thioesterase superfamily protein
SCN18_25_8_15_R2_B_scaffold_486_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6246..6401
DNA (156bp) protein (52aa)
SCN18_25_8_15_R2_B_scaffold_486_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6419..8827
DNA (2409bp) protein (803aa)
Methyl-accepting chemotaxis protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBP5_PELHB
Putative methyl-accepting chemotaxis protein MCP {ECO:0000313|EMBL:KFC73906.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
methyl-accepting chemotaxis protein
SCN18_25_8_15_R2_B_scaffold_486_trna_1
unknown

Not on your lists

8951..9023
DNA (73bp)
transferRNA Met
SCN18_25_8_15_R2_B_scaffold_486_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8969..9235)
DNA (267bp) protein (89aa)
SCN18_25_8_15_R2_B_scaffold_486_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9449..9757)
DNA (309bp) protein (103aa)
SCN18_25_8_15_R2_B_scaffold_486_14
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9984..10937)
DNA (954bp) protein (318aa)
hypothetical protein n=2 Tax=unclassified candidate division EM 19 RepID=UPI0003770B44
Polysaccharide deacetylase {ECO:0000313|EMBL:KFC67376.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
polysaccharide deacetylase
SCN18_25_8_15_R2_B_scaffold_486_15
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10934..12172)
DNA (1239bp) protein (413aa)
Glycosyl transferase group 1 n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IHF0_METNO
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACL61613.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCN18_25_8_15_R2_B_scaffold_486_16
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12311..15154
DNA (2844bp) protein (948aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EDW2_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF82874.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
membrane protein
SCN18_25_8_15_R2_B_scaffold_486_17
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15232..16245)
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI0002FF3B77
Glycosyl transferase family 2 {ECO:0000313|EMBL:CDX43260.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
glycosyl transferase family 2
SCN18_25_8_15_R2_B_scaffold_486_18
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16242..17012)
DNA (771bp) protein (257aa)
SCN18_25_8_15_R2_B_scaffold_486_19
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17020..18996)
DNA (1977bp) protein (659aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI000369CA52
putative transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:CAK03345.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
SCN18_25_8_15_R2_B_scaffold_486_20
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18980..20065)
DNA (1086bp) protein (362aa)
Glycosyl transferase group 1 n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IHF3_METNO
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACL61616.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCN18_25_8_15_R2_B_scaffold_486_21
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20094..20870)
DNA (777bp) protein (259aa)
Putative glycosyltransferase n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1M5Z6_RHIL3
putative glycosyltransferase
Putative glycosyltransferase {ECO:0000313|EMBL:CAK03343.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
SCN18_25_8_15_R2_B_scaffold_486_22
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20956..22278)
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI0002DE60FE
polysaccharide export protein
Polysaccharide export protein {ECO:0000313|EMBL:ACL61608.1}; Flags: Precursor;; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCN18_25_8_15_R2_B_scaffold_486_23
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22460..23692
DNA (1233bp) protein (411aa)
UPI0003CE5227 related cluster n=1 Tax=unknown RepID=UPI0003CE5227
Beta-mannosidase {ECO:0000313|EMBL:ESY82437.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
beta-mannosidase
SCN18_25_8_15_R2_B_scaffold_486_24
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24050..24412
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KG35_MESAW
Uncharacterized protein {ECO:0000313|EMBL:KFC66952.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_486_25
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24422..25123)
DNA (702bp) protein (234aa)
Putative phosphoesterase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DG18_SINAD
Phosphoesterase {ECO:0000313|EMBL:KJV25345.1}; TaxID=332411 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Aquitalea.;" source="Aquitalea magnusonii.;"
phosphoesterase
SCN18_25_8_15_R2_B_scaffold_486_26
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25227..25850)
DNA (624bp) protein (208aa)
UPI0003CF6352 related cluster n=1 Tax=unknown RepID=UPI0003CF6352
Transcriptional regulator {ECO:0000313|EMBL:ESY99921.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_486_27
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25926..27353
DNA (1428bp) protein (476aa)
Transcriptional regulator, GntR family with aminotransferase domain protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IX43_METNO
transcriptional regulator, GntR family with aminotransferase domain-containing protein
Transcriptional regulator, GntR family with aminotransferase domain protein {ECO:0000313|EMBL:ACL63084.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCN18_25_8_15_R2_B_scaffold_486_28
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27357..27983)
DNA (627bp) protein (209aa)
TetR family transcriptional regulator n=2 Tax=Bordetella holmesii RepID=M5NIW5_9BORD
Transcriptional regulator, TetR family {ECO:0000313|EMBL:KAK77920.1}; TaxID=1331212 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella holmesii CDC-H809-BH.;"
Transcriptional regulator, TetR family
SCN18_25_8_15_R2_B_scaffold_486_29
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27989..29182)
DNA (1194bp) protein (398aa)
CoA transferase n=1 Tax=Pseudomonas stutzeri MF28 RepID=U3HVF1_PSEST
CoA transferase {ECO:0000313|EMBL:EQM81228.1}; TaxID=1333856 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri MF28.;"
CoA-transferase
Displaying items 1-30 of 66 in total

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