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SCN18_25_8_15_R2_B_scaffold_1803

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1803_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..848)
DNA (846bp) protein (282aa)
Protein TolB n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVA0_BREDI
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Tol-Pal system beta propeller repeat protein TolB
SCN18_25_8_15_R2_B_scaffold_1803_2
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(963..1850)
DNA (888bp) protein (296aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W8E0_9CAUL
Putative uncharacterized protein {ECO:0000313|EMBL:EDX80948.1}; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. BAL3.;"
TolA protein
SCN18_25_8_15_R2_B_scaffold_1803_3
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1857..2318)
DNA (462bp) protein (154aa)
Protein TolR n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QPZ3_BREDI
Protein TolR {ECO:0000313|EMBL:EKY30078.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
protein TolR
SCN18_25_8_15_R2_B_scaffold_1803_4
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2322..3086)
DNA (765bp) protein (255aa)
Protein TolQ n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QR96_BREDI
Protein TolQ {ECO:0000313|EMBL:EKY30077.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
protein TolQ
SCN18_25_8_15_R2_B_scaffold_1803_5
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3237..3683)
DNA (447bp) protein (149aa)
Tol-pal system-associated acyl-CoA thioesterase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QQ75_BREDI
Tol-pal system-associated acyl-CoA thioesterase {ECO:0000313|EMBL:EKY30076.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
tol-pal system-associated acyl-CoA thioesterase
SCN18_25_8_15_R2_B_scaffold_1803_6
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3687..4043)
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVA3_BREDI
Putative uncharacterized protein {ECO:0000313|EMBL:EGF96532.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCN18_25_8_15_R2_B_scaffold_1803_7
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4195..4404)
DNA (210bp) protein (70aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVA4_BREDI
Putative uncharacterized protein {ECO:0000313|EMBL:EGF96533.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1803_8
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4532..5305
DNA (774bp) protein (258aa)
Probable transcriptional regulatory protein BDIM_03390 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVA5_BREDI
Probable transcriptional regulatory protein BDIM_03390 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1803_9
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5312..6028)
DNA (717bp) protein (239aa)
Uncharacterized protein {ECO:0000313|EMBL:GAM97052.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
SCN18_25_8_15_R2_B_scaffold_1803_10
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6158..6676
DNA (519bp) protein (173aa)
Cation-binding protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVA6_BREDI
Cation-binding protein {ECO:0000313|EMBL:EGF96535.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1803_11
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6669..7370
DNA (702bp) protein (234aa)
MgtC family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVA7_BREDI
MgtC family protein {ECO:0000313|EMBL:EGF96536.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
MgtC/SapB transporter
SCN18_25_8_15_R2_B_scaffold_1803_12
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7430..8152
DNA (723bp) protein (241aa)
MgtC family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVA8_BREDI
MgtC family protein {ECO:0000313|EMBL:EGF96537.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
MgtC/SapB transporter
SCN18_25_8_15_R2_B_scaffold_1803_13
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8235..8747
DNA (513bp) protein (171aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVA9_BREDI
SCN18_25_8_15_R2_B_scaffold_1803_14
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8744..9370
DNA (627bp) protein (209aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QPZ0_BREDI
Holliday junction DNA helicase RuvA
SCN18_25_8_15_R2_B_scaffold_1803_15
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9381..10412
DNA (1032bp) protein (344aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QPY6_BREDI
Holliday junction DNA helicase RuvB
SCN18_25_8_15_R2_B_scaffold_1803_16
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10424..11269)
DNA (846bp) protein (282aa)
Putative ribokinase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QQ66_BREDI
Putative ribokinase {ECO:0000313|EMBL:EKY30066.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
PfkB domain-containing protein
SCN18_25_8_15_R2_B_scaffold_1803_17
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11266..12216)
DNA (951bp) protein (317aa)
Putative cytidine/uridine-specific hydrolase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QQT7_BREDI
Putative cytidine/uridine-specific hydrolase {ECO:0000313|EMBL:EKY30065.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
inosine/uridine-preferring nucleoside hydrolase
SCN18_25_8_15_R2_B_scaffold_1803_18
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12330..13001
DNA (672bp) protein (224aa)
DsbA-like protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QLC3_BREDI
DsbA-like protein {ECO:0000313|EMBL:EKY28778.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
DSBA oxidoreductase
SCN18_25_8_15_R2_B_scaffold_1803_19
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13193..14020)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QLB3_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY28779.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1803_20
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14135..15226)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q07GC2_ROSDO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI93477.1}; TaxID=375451 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter denitrificans (strain ATCC 33942 / OCh 114) (Erythrobacter; sp. (strain OCh 114)) (Roseobacter denitrificans).;"
SCN18_25_8_15_R2_B_scaffold_1803_21
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15228..16412)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q07GC3_ROSDO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI93476.1}; TaxID=375451 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter denitrificans (strain ATCC 33942 / OCh 114) (Erythrobacter; sp. (strain OCh 114)) (Roseobacter denitrificans).;"
SCN18_25_8_15_R2_B_scaffold_1803_22
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16587..17747)
DNA (1161bp) protein (387aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Phosphomethylpyrimidine synthase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVB0_BREDI
thiamine biosynthesis protein ThiC
Displaying 22 items

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